RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 HMGCS1Q01581 520 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 ZNF45Q02386 682 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 EGFEM1PQ0D2K5 195 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 FZD2Q14332 565 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 KYAT1Q16773 422 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 GCSAMLQ5JQS6 135 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 COA6Q5JTJ3 125 aaKnown RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 THEM4Q5T1C6 240 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 FAM27D1Q5T7N8 215 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 FAAP20Q6NZ36 180 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 TMEM25Q86YD3 366 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 RAB43Q86YS6 212 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 FBXO16Q8IX29 292 aaPredicted RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 DAW1Q8N136 415 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 ZFP41Q8N8Y5 198 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 OR10W1Q8NGF6 305 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 OR2G3Q8NGZ4 309 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 UCN3Q969E3 161 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 IL22RA2Q969J5 263 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 SGTBQ96EQ0 304 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 CHMP6Q96FZ7 201 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 RBBP8Q99708 897 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 NICN1Q9BSH3 213 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 GABARAPL3Q9BY60 117 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 POTEKPQ9BYX7 375 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 TMPRSS5Q9H3S3 457 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 DSN1Q9H410 356 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 IFT46Q9NQC8 304 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 MARCH5Q9NX47 278 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 ZNF581Q9P0T4 197 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 TRMT112Q9UI30 125 aaKnown RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 ZNF107Q9UII5 783 aaPredicted RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 RAB23Q9ULC3 237 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 SMIM23A6NLE4 172 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 H7C1H1 209 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 M0R1B8 84 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 XKRYO14609 159 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 PSIP1O75475 530 aaKnown RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 UPK1BO75841 260 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 SERF1AO75920 110 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ATP5HO75947 161 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 RAB3DO95716 219 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 TTC4O95801 387 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 PTTG1O95997 202 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 PTHP01270 115 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 EIF4EP06730 217 aaKnown RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 ICAM2P13598 275 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 GDF1P27539 372 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 HOXA9P31269 272 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 BTCP35070 178 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 P2RY4P51582 365 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 UBE2E1P51965 193 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 SLC35A1P78382 337 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 IRX1P78414 480 aaPredicted RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 PRKCDQ05655 676 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 GNA13Q14344 377 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ZNF266Q14584 549 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 PSG5Q15238 335 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ZNHIT3Q15649 155 aaPredicted RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 TMEM249Q2WGJ8 235 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 TIMM50Q3ZCQ8 353 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 CHRFAM7AQ494W8 412 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 LRRC10Q5BKY1 277 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 SDHAF4Q5VUM1 108 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 KHDRBS2Q5VWX1 349 aaKnown RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 OR2T5Q6IEZ7 315 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 TEX43Q6ZNM6 134 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 RALGPS2Q86X27 583 aaPredicted RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 SLC30A8Q8IWU4 369 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 KRT222Q8N1A0 295 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 LRRC52Q8N7C0 313 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 OR8G5Q8NG78 346 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 OR8J2Q8NGG1 315 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 OR10G9Q8NGN4 311 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 OR10J6PQ8NGY7 276 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 OR2T29Q8NH02 315 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 SFXN5Q8TD22 340 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 LRRC29Q8WV35 223 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 BTN2A3PQ96KV6 586 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 UBE2E2Q96LR5 201 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 VAT1Q99536 393 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 PDCD1LG2Q9BQ51 273 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 RSG1Q9BU20 258 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ZNF426Q9BUY5 554 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ACOT13Q9NPJ3 140 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 TREX1Q9NSU2 369 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 NLE1Q9NVX2 485 aaPredicted RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 EMC3Q9P0I2 261 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ABCB11O95342 1321 aa2.88□□□□□ -1.95
TDP1-217ENST00000557782 ARID1BQ8NFD5 2236 aaPredicted RBP2.88□□□□□ -1.95
TDP1-217ENST00000557782 C2orf16Q68DN1 1984 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 FHOD3Q2V2M9 1422 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 IGHV2OR16-5A0A0B4J2B6 119 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 GOLGA8KD6RF30 607 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 GOLGA8MH3BSY2 632 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 H7C423 109 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ADAP1O75689 374 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 DEXIO95424 95 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms