RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 C4orf45Q96LM5 186 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF75AQ96N20 296 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 PBOV1Q9GZY1 135 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 COMMD4Q9H0A8 199 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 OR10A2Q9H208 303 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 CDH20Q9HBT6 801 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 NGBQ9NPG2 151 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 FRRS1LQ9P0K9 344 aa9.58□□□□□ -0.88
TMEM260-208ENST00000555905 EIF3KQ9UBQ5 218 aaKnown RBP9.58□□□□□ -0.88
TMEM260-208ENST00000555905 SIRT4Q9Y6E7 314 aaPredicted RBP9.58□□□□□ -0.88
TMEM260-208ENST00000555905 M0R1B8 84 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 TBX1O43435 398 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 GPRIN2O60269 458 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 LCATP04180 440 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 CD1AP06126 327 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 CELA3BP08861 270 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 UBCP0CG48 685 aaKnown RBP9.57□□□□□ -0.88
TMEM260-208ENST00000555905 SLC2A1P11166 492 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 CCL2P13500 99 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 CD53P19397 219 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 PSMA1P25786 263 aaKnown RBP9.57□□□□□ -0.88
TMEM260-208ENST00000555905 NANOS3P60323 173 aaKnown RBP9.57□□□□□ -0.88
TMEM260-208ENST00000555905 TRAM1Q15629 374 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 WDR38Q5JTN6 314 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 UNQ6126/PRO20091Q6UXV3 157 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF704Q6ZNC4 412 aaPredicted RBP9.57□□□□□ -0.88
TMEM260-208ENST00000555905 WFDC8Q8IUA0 241 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 OR52H1Q8NGJ2 320 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 GHSRQ92847 366 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 ZC3HAV1LQ96H79 300 aaKnown RBP9.57□□□□□ -0.88
TMEM260-208ENST00000555905 WFIKKN1Q96NZ8 548 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 KCNS3Q9BQ31 491 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 G6PC2Q9NQR9 355 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 NDUFB11Q9NX14 153 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 NUFIP1Q9UHK0 495 aaKnown RBP9.57□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF281Q9Y2X9 895 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 ZNF462Q96JM2 2506 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
TMEM260-208ENST00000555905 IGHV1-18A0A0C4DH31 117 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TUBAL3A6NHL2 446 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 OR4C45A6NMZ5 311 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 ZFPL1O95159 310 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 SERPINA3P01011 423 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 CECR9P0C854 216 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 GABRA5P31644 462 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 PEX19P40855 299 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 KIR3DL2P43630 455 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 HGFACQ04756 655 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TFF3Q07654 80 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 SSX1Q16384 188 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 ODF4Q2M2E3 257 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TIMM50Q3ZCQ8 353 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 YIF1BQ5BJH7 314 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TMEM244Q5VVB8 128 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TMEM108Q6UXF1 575 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 PRSS45Q7RTY3 260 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 NAA40Q86UY6 237 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 COMMD2Q86X83 199 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 ELMOD2Q8IZ81 293 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 MS4A15Q8N5U1 240 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 OR8B12Q8NGG6 310 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 RPS4Y2Q8TD47 263 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TMEM203Q969S6 136 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 APOBEC3DQ96AK3 386 aaPredicted RBP9.56□□□□□ -0.88
TMEM260-208ENST00000555905 YIPF6Q96EC8 236 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 PGLYRP3Q96LB9 341 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 PDCD1LG2Q9BQ51 273 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 TMED9Q9BVK6 235 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 C1QTNF5Q9BXJ0 243 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 BATF3Q9NR55 127 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 SLC22A13Q9Y226 551 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 HCFC1P51610 2035 aa9.56□□□□□ -0.88
TMEM260-208ENST00000555905 A0A0U1RQV5 110 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 PYCARD-AS1I3L0S3 204 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 NOL3O60936 208 aaKnown RBP9.55□□□□□ -0.88
TMEM260-208ENST00000555905 CRYAAP02489 173 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 TTRP02766 147 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 HLA-DPB1P04440 258 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 ISG15P05161 165 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 THBDP07204 575 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 ACHEP22303 614 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 GRNP28799 593 aaKnown RBP9.55□□□□□ -0.88
TMEM260-208ENST00000555905 PCSK6P29122 969 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 TGFBR2P37173 567 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 RPS25P62851 125 aaKnown RBP9.55□□□□□ -0.88
TMEM260-208ENST00000555905 NAAAQ02083 359 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 MALLQ13021 153 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 GFOD2Q3B7J2 385 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 GPR107Q5VW38 600 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 MYPOPQ86VE0 399 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-208ENST00000555905 PAQR4Q8N4S7 273 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-208ENST00000555905 OR5L1Q8NGL2 311 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 OR51E1Q8TCB6 317 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 GPR148Q8TDV2 347 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 PPP1R14AQ96A00 147 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 FUNDC2Q9BWH2 189 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 RGCCQ9H4X1 137 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 TBCCD1Q9NVR7 557 aa9.55□□□□□ -0.88
TMEM260-208ENST00000555905 NPAP1Q9NZP6 1156 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms