RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 USP51Q70EK9 711 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 PGAP1Q75T13 922 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.31□□□□□ -0.76
SRP54-206ENST00000555317 OR5AS1Q8N127 324 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 ZNF454Q8N9F8 522 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 BBS1Q8NFJ9 593 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 OR2Z1Q8NG97 314 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 OR10S1Q8NGN2 331 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 TIMD4Q96H15 378 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 KCNJ15Q99712 375 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 CIB1Q99828 191 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 TOR3AQ9H497 397 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 YAE1D1Q9NRH1 226 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.31□□□□□ -0.76
SRP54-206ENST00000555317 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 IGHV4-61A0A0C4DH41 118 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 CLDN25C9JDP6 229 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 TBX1O43435 398 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 TLX2O43763 284 aaPredicted RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 SELENOFO60613 162 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 ANXA2P07355 339 aaKnown RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 LYNP07948 512 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 H2BFMP0C1H6 154 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 TNFRSF1AP19438 455 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 COL8A2P25067 703 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 CRYBB2P43320 205 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 CX3CR1P49238 355 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 PRKXP51817 358 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 RAD23AP54725 363 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 SLC3A1Q07837 685 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 RIN1Q13671 783 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 KRTAP27-1Q3LI81 207 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 SLX4IPQ5VYV7 408 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 OR2T2Q6IF00 324 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 COLCA1Q6ZS62 124 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 PEG10Q86TG7 708 aaKnown RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 TIGD4Q8IY51 512 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 BHLHE23Q8NDY6 225 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 OR13G1Q8NGZ3 307 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 ST7LQ8TDW4 575 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 THEM6Q8WUY1 208 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 SPRYD4Q8WW59 207 aaPredicted RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 CNN2Q99439 309 aaKnown RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 PKP2Q99959 881 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 ABHD6Q9BV23 337 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 MARCH7Q9H992 704 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 ZNF275Q9NSD4 429 aaPredicted RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 LAMP5Q9UJQ1 280 aa10.3□□□□□ -0.76
SRP54-206ENST00000555317 YLPM1P49750 1951 aaKnown RBP10.3□□□□□ -0.76
SRP54-206ENST00000555317 A0A096LNT2 108 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 GGT3PA6NGU5 568 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 ZAR1LA6NP61 321 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 PRKYO43930 277 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 ADH4P08319 380 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 PSKH1P11801 424 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 CDC42P60953 191 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 CDK5R2Q13319 367 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 GK2Q14410 553 aaPredicted RBP10.29□□□□□ -0.76
SRP54-206ENST00000555317 TIGD6Q17RP2 521 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 RSPO1Q2MKA7 263 aaPredicted RBP10.29□□□□□ -0.76
SRP54-206ENST00000555317 TMEM255AQ5JRV8 349 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 SLC16A9Q7RTY1 509 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 GID4Q8IVV7 300 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 TCEANCQ8N8B7 351 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 OR8G5Q8NG78 346 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 OTOSQ8NHW6 89 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 TMEM163Q8TC26 289 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 RNF133Q8WVZ7 376 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 CCL17Q92583 94 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 YIPF5Q969M3 257 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 IL4I1Q96RQ9 567 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 GABARAPL3Q9BY60 117 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 OPA3Q9H6K4 179 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 NARFLQ9H6Q4 476 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 S100A14Q9HCY8 104 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 TMEM100Q9NV29 134 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 IMPAD1Q9NX62 359 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 DNAJC27Q9NZQ0 273 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 NOP16Q9Y3C1 178 aaKnown RBP10.29□□□□□ -0.76
SRP54-206ENST00000555317 TMEM14AQ9Y6G1 99 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
SRP54-206ENST00000555317 LRP5LA4QPB2 252 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 SLC22A31A6NKX4 558 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 H3BNX3 289 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 M0R129 80 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 EI24O14681 340 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 XRCC2O43543 280 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 BAG2O95816 211 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 CD55P08174 381 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 MRPL3P09001 348 aaKnown RBP10.28□□□□□ -0.76
SRP54-206ENST00000555317 SLC2A1P11166 492 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 ZNF16P17020 682 aaPredicted RBP10.28□□□□□ -0.76
SRP54-206ENST00000555317 SLC2A5P22732 501 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 EPHA2P29317 976 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 OTX1P32242 354 aaPredicted RBP10.28□□□□□ -0.76
SRP54-206ENST00000555317 SRP9P49458 86 aaKnown RBP10.28□□□□□ -0.76
SRP54-206ENST00000555317 ALDH3A2P51648 485 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 TRIP10Q15642 601 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms