RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 A0A087WUU8 490 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 TRBV4-1A0A0J9YWV2 114 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 MCIDASD6RGH6 385 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 BLOC1S5-TXNDC5H3BN57 136 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 NDUFAB1O14561 156 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CDC42EP2O14613 210 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 TLX2O43763 284 aaPredicted RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 MGRN1O60291 552 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CRLF1O75462 422 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SLC2A10O95528 541 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 RAB36O95755 333 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF682O95780 498 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SERPINA1P01009 418 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SEMG1P04279 462 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 HIST1H2ABP04908 130 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 IFNW1P05000 195 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 QDPRP09417 244 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 OR8G3PP0DMU2 310 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 IGHV4-31P0DP07 118 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CD79AP11912 226 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 IFI30P13284 250 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SLC25A16P16260 332 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 NPR2P20594 1047 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 GLRXP35754 106 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 PDLIM4P50479 330 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 VLDLRP98155 873 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 MYBPC1Q00872 1141 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 PRKCDQ05655 676 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FMODQ06828 376 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ST3GAL3Q11203 375 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 TRAM2Q15035 370 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 RAB35Q15286 201 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 IQCCQ4KMZ1 466 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ALG10Q5BKT4 473 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 C6orf52Q5T4I8 152 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ASPHD1Q5U4P2 390 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 KRT80Q6KB66 452 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SLC25A47Q6Q0C1 308 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FOXL2NBQ6ZUU3 175 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 MBOAT2Q6ZWT7 520 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 HIST3H2AQ7L7L0 130 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FAM122BQ7Z309 247 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 PIWIL3Q7Z3Z3 882 aaKnown RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 IGFN1Q86VF2 1251 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SVOPLQ8N434 492 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SLC22A24Q8N4F4 322 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FAM86B1Q8N7N1 296 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CLDN22Q8N7P3 220 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SYT14Q8NB59 555 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 OR4K5Q8NGD3 323 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF519Q8TB69 540 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ACOT11Q8WXI4 607 aaPredicted RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 LZICQ8WZA0 190 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 HIST1H2ACQ93077 130 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 NABP1Q96AH0 204 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CMTM5Q96DZ9 223 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 TSPAN32Q96QS1 320 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SH3GL3Q99963 347 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 RHNO1Q9BSD3 238 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FUZQ9BT04 418 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ALG12Q9BV10 488 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FNDC11Q9BVV2 318 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 MRPL37Q9BZE1 423 aaKnown RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FAM107BQ9H098 131 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 NSRP1Q9H0G5 558 aaKnown RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 TXNIPQ9H3M7 391 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ANKRD19PQ9H560 264 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 DENND2DQ9H6A0 471 aaPredicted RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 EFCAB1Q9HAE3 211 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SPAG4Q9NPE6 437 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 NDUFAF4Q9P032 175 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 MYEF2Q9P2K5 600 aaKnown RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 STX18Q9P2W9 335 aaKnown RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 RHCGQ9UBD6 479 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 SLC7A8Q9UHI5 535 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FBXL3Q9UKT7 428 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF346Q9UL40 294 aaKnown RBP3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CMAHPQ9Y471 501 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 FKBP7Q9Y680 259 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 ENPP4Q9Y6X5 453 aa3.54□□□□□ -1.84
VTI1B-203ENST00000554636 CMYA5Q8N3K9 4069 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ATRQ13535 2644 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RPS10-NUDT3A0A1W2PQS6 291 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 A0A1W2PRG6 482 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 A0A1W2PRQ8 180 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 HTR3EA5X5Y0 456 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 GMNCA6NCL1 334 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 EFCAB9A8MZ26 197 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 H7C1C5 153 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 NDUFS8O00217 210 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ENTPD5O75356 428 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 DIRAS1O95057 198 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 STAMBPO95630 424 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SNAP29O95721 258 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SERPINA5P05154 406 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 H1F0P07305 194 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 CD14P08571 375 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SAGP10523 405 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms