RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ELFN2Q5R3F8 820 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 CD300LDQ6UXZ3 194 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 LNX2Q8N448 690 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 GJC3Q8NFK1 279 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 OR2T33Q8NG76 320 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 OR8D4Q8NGM9 314 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 OR1F12Q8NHA8 337 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 RHOXF1Q8NHV9 184 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 FAM81AQ8TBF8 368 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 KLF14Q8TD94 323 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-211ENST00000554310 SGCDQ92629 289 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 RDH5Q92781 318 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 SIGLEC11Q96RL6 698 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 DCLRE1CQ96SD1 692 aaKnown RBP11.16□□□□□ -0.62
SHMT2-211ENST00000554310 OR2J1Q9GZK6 312 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 YAE1D1Q9NRH1 226 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 CYSLTR2Q9NS75 346 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 KCNG2Q9UJ96 466 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 LHFPL6Q9Y693 200 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 ATRQ13535 2644 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-211ENST00000554310 PTGES3LE9PB15 166 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 RER1O15258 196 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 RGS10O43665 173 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 NCR1O76036 304 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 NGFP01138 241 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 TACSTD2P09758 323 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 GABRB1P18505 474 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 LIPAP38571 399 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 MPV17P39210 176 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 RGS6P49758 472 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 TMBIM6P55061 237 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 CDC42P60953 191 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 HIST1H3AP68431 136 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
SHMT2-211ENST00000554310 MEP1BQ16820 701 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 ALKBH6Q3KRA9 238 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 CCDC92Q53HC0 331 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-211ENST00000554310 FAM209AQ5JX71 171 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 SLC35F1Q5T1Q4 408 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 HIST2H3PS2Q5TEC6 136 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 OTPQ5XKR4 325 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 HIST2H3AQ71DI3 136 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 OR2T4Q8NH00 348 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 C12orf43Q96C57 262 aaKnown RBP11.15□□□□□ -0.62
SHMT2-211ENST00000554310 COQ7Q99807 217 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 TSSK6Q9BXA6 273 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 FN3KQ9H479 309 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 SRA1Q9HD15 236 aaKnown RBP11.15□□□□□ -0.62
SHMT2-211ENST00000554310 FKBP14Q9NWM8 211 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 MALRD1Q5VYJ5 2156 aa11.15□□□□□ -0.62
SHMT2-211ENST00000554310 NOL3O60936 208 aaKnown RBP11.14□□□□□ -0.63
SHMT2-211ENST00000554310 CRLF1O75462 422 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 SOX14O95416 240 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 GPANK1O95872 356 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 HLA-DQA2P01906 255 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 TFP02787 698 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 ADH4P08319 380 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-211ENST00000554310 MAGEB1P43366 347 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 ZNF81P51508 661 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 MMP15P51511 669 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-211ENST00000554310 GPR107Q5VW38 600 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 SLX4IPQ5VYV7 408 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 SLC18B1Q6NT16 456 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-211ENST00000554310 PROKR2Q8NFJ6 384 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 TEX47Q8TBZ9 253 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 HPS1Q92902 700 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 UBE2FQ969M7 185 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 DDOQ99489 341 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 TMEM160Q9NX00 188 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 PSORS1C1Q9UIG5 152 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 KLHL21Q9UJP4 597 aa11.14□□□□□ -0.63
SHMT2-211ENST00000554310 LYNX1G3V0Z9 82 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 H3BMQ9 156 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 TIMM8AO60220 97 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-211ENST00000554310 RP2O75695 350 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 IFNGP01579 166 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 LYNX1P0DP58 116 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 GPR6P46095 362 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-211ENST00000554310 TMEM33P57088 247 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 CCL8P80075 99 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 ECH1Q13011 328 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
SHMT2-211ENST00000554310 TMEM255AQ5JRV8 349 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 SYT6Q5T7P8 510 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-211ENST00000554310 C12orf73Q69YU5 71 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 CYB561A3Q8NBI2 242 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 SLC37A3Q8NCC5 494 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 OR2AJ1Q8NGZ0 328 aa11.13□□□□□ -0.63
SHMT2-211ENST00000554310 OR4Q3Q8NH05 313 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms