RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 OR51A2Q8NGJ7 313 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 PMEPA1Q969W9 287 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 CHIAQ9BZP6 476 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 RHBDD3Q9Y3P4 386 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 GVINP1Q7Z2Y8 2422 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 AQP7P3A6NL99 342 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 DISC1C4P0D8 188 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 PROB1E7EW31 1015 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 P2RY10O00398 339 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 TRAF3IP2O43734 574 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-205ENST00000553474 CHRM2P08172 466 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 SSTR2P30874 369 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 S100A11P31949 105 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 SLC35A1P78382 337 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 FGL1Q08830 312 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 C4orf46Q504U0 113 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 C3P1Q6ZMU1 363 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 IDO2Q6ZQW0 420 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 MUC20Q8N307 709 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-205ENST00000553474 ELMOD3Q96FG2 381 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 CGGBP1Q9UFW8 167 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-205ENST00000553474 FBXO9Q9UK97 447 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF292O60281 2723 aa11.47□□□□□ -0.57
SHMT2-205ENST00000553474 PHF3Q92576 2039 aaKnown RBP11.47□□□□□ -0.57
SHMT2-205ENST00000553474 CDX4O14627 284 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-205ENST00000553474 OR4E1P0C645 316 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 RRASP10301 218 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF43P17038 809 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 M6PRP20645 277 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 AGTR1P30556 359 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 CLDN6P56747 220 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 GRB2P62993 217 aaKnown RBP11.46□□□□□ -0.57
SHMT2-205ENST00000553474 GABREP78334 506 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 EXT1Q16394 746 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF260Q3ZCT1 412 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 NHLRC3Q5JS37 347 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 FAHD2BQ6P2I3 314 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-205ENST00000553474 OPN5Q6U736 354 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 OR4K17Q8NGC6 315 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 OR4D6Q8NGJ1 314 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 FGGYQ96C11 551 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 FAHD2AQ96GK7 314 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 GLTPQ9NZD2 209 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 PLEKHA6Q9Y2H5 1048 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 LHFPL6Q9Y693 200 aa11.46□□□□□ -0.57
SHMT2-205ENST00000553474 TEX51A0A1B0GUA7 166 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 RAB27BO00194 218 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 EIF1BO60739 113 aaKnown RBP11.46□□□□□ -0.58
SHMT2-205ENST00000553474 VAMP5O95183 116 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 AMY2AP04746 511 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CCL1P22362 96 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CTSSP25774 331 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CALCRP30988 508 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 GNALP38405 381 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 H2BFSP57053 126 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 LSM6P62312 80 aaKnown RBP11.46□□□□□ -0.58
SHMT2-205ENST00000553474 QRFPP83859 136 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 SRSF4Q08170 494 aaKnown RBP11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CAMK2BQ13554 666 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CORO6Q6QEF8 472 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 GTPBP8Q8N3Z3 284 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-205ENST00000553474 BPIFB2Q8N4F0 458 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 ZDHHC22Q8N966 263 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CCDC54Q8NEL0 328 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 OR10S1Q8NGN2 331 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 OR8S1Q8NH09 359 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 SFXN2Q96NB2 322 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 EMC6Q9BV81 110 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CNTD2Q9H8S5 307 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 GPN3Q9UHW5 284 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-205ENST00000553474 POLR1DQ9Y2S0 133 aa11.46□□□□□ -0.58
SHMT2-205ENST00000553474 CHCHD2Q9Y6H1 151 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-205ENST00000553474 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF726A6NNF4 738 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 GFRA3O60609 400 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 RP2O75695 350 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 B3GALNT1O75752 331 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 KLK3P07288 261 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF735P0CB33 412 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF883P0CG24 379 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 UBBP0CG47 229 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 FOSL1P15407 271 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 RPA2P15927 270 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 PPP3CBP16298 524 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF20P17024 532 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 HLA-GP17693 338 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 CXCL2P19875 107 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 FOXL2P58012 376 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 POU4F3Q15319 338 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 RNASE10Q5GAN6 216 aaKnown RBP11.45□□□□□ -0.58
SHMT2-205ENST00000553474 C11orf88Q6PI97 169 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 CHMP1BQ7LBR1 199 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 C12orf45Q8N5I9 185 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-205ENST00000553474 WDSUB1Q8N9V3 476 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 OR52B4Q8NGK2 314 aa11.45□□□□□ -0.58
SHMT2-205ENST00000553474 OR5M1Q8NGP8 315 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms