RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TPD52L3Q96J77 140 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 COQ7Q99807 217 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 HCAR1Q9BXC0 346 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 HDHD2Q9H0R4 259 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 DPAGT1Q9H3H5 408 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 TMBIM4Q9HC24 238 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 SNX13Q9Y5W8 968 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 LHFPL6Q9Y693 200 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 A0A087WUU8 490 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 SOCS2O14508 198 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 FFAR1O14842 300 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 AHCYL1O43865 530 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 TSPAN9O75954 239 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 IFNA14P01570 189 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 GYPAP02724 150 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 OPN1MWP04001 364 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 OPN1MW2P0DN77 364 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 OPN1MW3P0DN78 364 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 HIST1H3AP68431 136 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 PRB3Q04118 309 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-209ENST00000553308 DBPQ10586 325 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-209ENST00000553308 GK2Q14410 553 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-209ENST00000553308 TRAM2Q15035 370 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 OR8G1Q15617 311 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 RSPO1Q2MKA7 263 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-209ENST00000553308 ZBED5Q49AG3 693 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 HIST2H3PS2Q5TEC6 136 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 TBPL2Q6SJ96 375 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 ZNF730Q6ZMV8 503 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 COLCA1Q6ZS62 124 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 PTCHD4Q6ZW05 846 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 HIST2H3AQ71DI3 136 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 BTN2A1Q7KYR7 527 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 VMO1Q7Z5L0 202 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 FAM156AQ8NDB6 213 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 LRTOMTQ8WZ04 291 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 NUAK2Q9H093 628 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 FN3KRPQ9HA64 309 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 NMNAT1Q9HAN9 279 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-209ENST00000553308 ZNRD1Q9P1U0 126 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 RNF7Q9UBF6 113 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 RPS6KA6Q9UK32 745 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 VPREB3Q9UKI3 123 aa7.48□□□□□ -1.21
SYNE2-209ENST00000553308 IGHV3OR15-7A0A075B7D8 119 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 TRAV38-1A0A0B4J264 116 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 A0A1B0GW55 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 BTBD17A6NE02 478 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 OOEPA6NGQ2 149 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DCTN6O00399 190 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DVL1O14640 695 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ACSM4P0C7M7 580 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 CA6P23280 308 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ANOS1P23352 680 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 SDHAP31040 664 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 IFNA8P32881 189 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 KDELR2P33947 212 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 CENPAP49450 140 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DLX1P56177 255 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 POU4F2Q12837 409 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 CYLC2Q14093 348 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-209ENST00000553308 KCNJ8Q15842 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 KRTAP27-1Q3LI81 207 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ERICH5Q6P6B1 374 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4L9Q6RFH8 374 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-209ENST00000553308 CFAP77Q6ZQR2 320 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ZNF826PQ6ZT77 177 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 VTCN1Q7Z7D3 282 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 NAA40Q86UY6 237 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 FAM90A1Q86YD7 464 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 LINC00346Q8IVM7 164 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 C11orf44Q8N8P7 122 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 GJC3Q8NFK1 279 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 OR8J3Q8NGG0 315 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 MRAPQ8TCY5 172 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ACOT11Q8WXI4 607 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ST8SIA4Q92187 359 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 SLCO4A1Q96BD0 722 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ZNF583Q96ND8 569 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 TSSK2Q96PF2 358 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 ADAT1Q9BUB4 502 aaKnown RBP7.47□□□□□ -1.21
SYNE2-209ENST00000553308 FNDC11Q9BVV2 318 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 VSX1Q9NZR4 365 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-209ENST00000553308 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 RPUSD1Q9UJJ7 312 aaKnown RBP7.47□□□□□ -1.21
SYNE2-209ENST00000553308 SIGLEC9Q9Y336 463 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 FAM96BQ9Y3D0 163 aa7.47□□□□□ -1.21
SYNE2-209ENST00000553308 PLXNB1O43157 2135 aa7.46□□□□□ -1.21
SYNE2-209ENST00000553308 A0A1B0GVI7 797 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 A0A1W2PRD5 423 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 A0A1W2PRF3 423 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 A0A1W2PRM7 423 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms