RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 GK3PQ14409 553 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 KRTAP27-1Q3LI81 207 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 ZNF362Q5T0B9 420 aaPredicted RBP13.39□□□□□ -0.27
CDK4-215ENST00000553237 RPL13AP3Q6NVV1 102 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 SLC27A4Q6P1M0 643 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 COLCA1Q6ZS62 124 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 PAPD5Q8NDF8 572 aaKnown RBP13.39□□□□□ -0.27
CDK4-215ENST00000553237 OR9Q1Q8NGQ5 310 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 ZNF420Q8TAQ5 688 aaPredicted RBP13.39□□□□□ -0.27
CDK4-215ENST00000553237 GIPC3Q8TF64 312 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 SLCO4A1Q96BD0 722 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 MAP6Q96JE9 813 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 MEGF10Q96KG7 1140 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 HCAR1Q9BXC0 346 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 C1QTNF5Q9BXJ0 243 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 MMADHCQ9H3L0 296 aaPredicted RBP13.39□□□□□ -0.27
CDK4-215ENST00000553237 YY1AP1Q9H869 796 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 GCM1Q9NP62 436 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 TBC1D23Q9NUY8 699 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 WNK2Q9Y3S1 2297 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 FBN3Q75N90 2809 aa13.39□□□□□ -0.27
CDK4-215ENST00000553237 TMEM178BH3BS89 294 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 MLNRO43193 412 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 E2F6O75461 281 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 ZNF205O95201 554 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 BTG1P62324 171 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 ZMYND11Q15326 602 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 TMEM179BQ7Z7N9 219 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 LRRC28Q86X40 367 aaPredicted RBP13.38□□□□□ -0.27
CDK4-215ENST00000553237 KLHL36Q8N4N3 616 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 OR10S1Q8NGN2 331 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 OR2T4Q8NH00 348 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 OR4Q3Q8NH05 313 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 FEVQ99581 238 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 NIPSNAP1Q9BPW8 284 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 SLC30A2Q9BRI3 323 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 C7orf69Q9H7B7 122 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 TMEM100Q9NV29 134 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 ARMC1Q9NVT9 282 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 TANC2Q9HCD6 1990 aa13.38□□□□□ -0.27
CDK4-215ENST00000553237 IQCF6A8MYZ5 107 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 F5H5P2 479 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 J3QLI3 93 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 FOXH1O75593 365 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 CYB5R3P00387 301 aaPredicted RBP13.37□□□□□ -0.27
CDK4-215ENST00000553237 HLA-DPB1P04440 258 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 GYPBP06028 91 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 PSKH1P11801 424 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 EPHA1P21709 976 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 MMP16P51512 607 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 TPTEP56180 551 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 SEC61A1P61619 476 aaKnown RBP13.37□□□□□ -0.27
CDK4-215ENST00000553237 MALLQ13021 153 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 CRMP1Q14194 572 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 GK2Q14410 553 aaPredicted RBP13.37□□□□□ -0.27
CDK4-215ENST00000553237 TMEM155Q4W5P6 130 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 CCDC121Q6ZUS5 278 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 LNX2Q8N448 690 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 SPICQ8N5J4 248 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 ZNF511Q8NB15 262 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 PATZ1Q9HBE1 687 aaKnown RBP13.37□□□□□ -0.27
CDK4-215ENST00000553237 MMP26Q9NRE1 261 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 PDP1Q9P0J1 537 aaPredicted RBP13.37□□□□□ -0.27
CDK4-215ENST00000553237 DNAJB9Q9UBS3 223 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 KCNG2Q9UJ96 466 aa13.37□□□□□ -0.27
CDK4-215ENST00000553237 ARRDC5A6NEK1 342 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 M0R135 149 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 CLUP10909 449 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 SELEP16581 610 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 PRKACGP22612 351 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 SLC6A9P48067 706 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 SRP9P49458 86 aaKnown RBP13.36□□□□□ -0.27
CDK4-215ENST00000553237 SCGB2A2Q13296 93 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 CD300LDQ6UXZ3 194 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 C1QL2Q7Z5L3 287 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 MOGAT3Q86VF5 341 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 HS3ST5Q8IZT8 346 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 TEX29Q8N6K0 151 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.36□□□□□ -0.27
CDK4-215ENST00000553237 NANPQ8TBE9 248 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 ZNF418Q8TF45 676 aaPredicted RBP13.36□□□□□ -0.27
CDK4-215ENST00000553237 SPTSSAQ969W0 71 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 ZNF799Q96GE5 643 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 RBM4Q9BWF3 364 aaKnown RBP13.36□□□□□ -0.27
CDK4-215ENST00000553237 OPN4Q9UHM6 478 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 N6AMT1Q9Y5N5 214 aa13.36□□□□□ -0.27
CDK4-215ENST00000553237 C5orf63A6NC05 138 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 TRAPPC2LH3BP13 241 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 TIPRLO75663 272 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 SPARCP09486 303 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 ANOS1P23352 680 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 GATA3P23771 443 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 FMO3P31513 532 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 MDH2P40926 338 aaKnown RBP13.35□□□□□ -0.27
CDK4-215ENST00000553237 PMELP40967 661 aa13.35□□□□□ -0.27
CDK4-215ENST00000553237 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms