RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 ZNF701Q9NV72 531 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-215ENST00000552823 B3GAT1Q9P2W7 334 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 R4GMQ9 66 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 PLCE1Q9P212 2302 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 LOC100289279A0A1B0GTE1 492 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 I3L521 148 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 L7N2F9 121 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 HSPB6O14558 160 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 TO15178 435 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 SOCS1O15524 211 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 SPRY1O43609 319 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-215ENST00000552823 ZNF254O75437 659 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 SLC22A5O76082 557 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 SPDEFO95238 335 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 IFNA6P05013 189 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 CELA3AP09093 270 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 NAT2P11245 290 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 EDN3P14138 238 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 PGAM2P15259 253 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 AVPR2P30518 371 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 ZNF93P35789 620 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-215ENST00000552823 MPLP40238 635 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 ZP1P60852 638 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 EGR3Q06889 387 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 GRK1Q15835 563 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 EMC4Q5J8M3 183 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 TMPPEQ6ZT21 453 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 C5orf24Q7Z6I8 188 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 CATSPERDQ86XM0 798 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 STK35Q8TDR2 534 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 ST8SIA1Q92185 356 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 DYRK2Q92630 601 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 KCNK17Q96T54 332 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 S100A13Q99584 98 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 ARL6Q9H0F7 186 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 ABCA1O95477 2261 aa4.96□□□□□ -1.62
LIMA1-215ENST00000552823 TLN1Q9Y490 2541 aaKnown RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 TRBV5-5A0A0J9YX44 114 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 A0A1W2PPC1 479 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 A0A1W2PQD3 144 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 C5orf51A6NDU8 294 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 A6NIZ1 184 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 ZNF736B4DX44 427 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 NUPL2O15504 423 aaKnown RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 TLX3O43711 291 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 CREBL2O60519 120 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 TXNDC12O95881 172 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 C1QBP02746 253 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 TMEM225BP0DP42 221 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 BDKRB2P30411 391 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 DLSTP36957 453 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 PTGDSP41222 190 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RGS19P49795 217 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 NPY4RP50391 375 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 AP3S2P59780 193 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RAP1BP61224 184 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RAP1AP62834 184 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RIN1Q13671 783 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 SLC9A3R2Q15599 337 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 LGALSLQ3ZCW2 172 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 C1QL2Q7Z5L3 287 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 FJX1Q86VR8 437 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 DTX1Q86Y01 620 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 KMT5CQ86Y97 462 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 ZNF584Q8IVC4 421 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 BEST3Q8N1M1 668 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 MUC20Q8N307 709 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RELL2Q8NC24 303 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 OR8B12Q8NGG6 310 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 ZFAND1Q8TCF1 268 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 ABHD3Q8WU67 409 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 POFUT1Q9H488 388 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 HEATR1Q9H583 2144 aaKnown RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 ACKR4Q9NPB9 350 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 P4HTMQ9NXG6 502 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 GSKIPQ9P0R6 139 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 IL17BQ9UHF5 180 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 LHFPL6Q9Y693 200 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 OR6C76A6NM76 312 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 SLC17A2O00624 439 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 KLF7O75840 302 aaPredicted RBP4.95□□□□□ -1.62
LIMA1-215ENST00000552823 KNG1P01042 644 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RAB40ALP0C0E4 278 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 FCGR2AP12318 317 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 CD53P19397 219 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 RAB3AP20336 220 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 OPRM1P35372 400 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 GNG2P59768 71 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 PLGLB1Q02325 96 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 DCAF12Q5T6F0 453 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 TMEM244Q5VVB8 128 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 ZNF774Q6NX45 483 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 SLC23A3Q6PIS1 610 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 OPN5Q6U736 354 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 CDH24Q86UP0 819 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 GABRG1Q8N1C3 465 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 TEX19Q8NA77 164 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 OR1M1Q8NGA1 313 aa4.95□□□□□ -1.62
LIMA1-215ENST00000552823 OR51T1Q8NGJ9 327 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms