RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 PDZD9Q8IXQ8 264 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 RNF113BQ8IZP6 322 aaKnown RBP13.49□□□□□ -0.25
RAB5C-209ENST00000552162 BOLLQ8N9W6 283 aaKnown RBP13.49□□□□□ -0.25
RAB5C-209ENST00000552162 GJC3Q8NFK1 279 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 DYDC1Q8WWB3 177 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 ACOT11Q8WXI4 607 aaPredicted RBP13.49□□□□□ -0.25
RAB5C-209ENST00000552162 LRTOMTQ8WZ04 291 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 NDEL1Q9GZM8 345 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 DPAGT1Q9H3H5 408 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 C16orf95Q9H693 158 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 VSX1Q9NZR4 365 aaPredicted RBP13.49□□□□□ -0.25
RAB5C-209ENST00000552162 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 RPS6KA6Q9UK32 745 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 SNX13Q9Y5W8 968 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 LHFPL6Q9Y693 200 aa13.49□□□□□ -0.25
RAB5C-209ENST00000552162 NBEAL2Q6ZNJ1 2754 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 A0A087WUU8 490 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 G3V4G9 280 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 LGALS8O00214 317 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 FFAR1O14842 300 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 IFNW1P05000 195 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 CSF1P09603 554 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 SDHAP31040 664 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 SELENOWP63302 87 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 OR8B8Q15620 311 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 KCNMB1Q16558 191 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 MEP1BQ16820 701 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 BEAN1Q3B7T3 259 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 TBPL2Q6SJ96 375 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 COLCA1Q6ZS62 124 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 TMPRSS11FQ6ZWK6 438 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 MBOAT2Q6ZWT7 520 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 NUAK2Q9H093 628 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 FN3KRPQ9HA64 309 aa13.48□□□□□ -0.25
RAB5C-209ENST00000552162 FAM220BPB1ANY3 271 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 SOCS2O14508 198 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 CENPAP49450 140 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 ARF6P62330 175 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 COX10Q12887 443 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 OR8G1Q15617 311 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 RSPO1Q2MKA7 263 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-209ENST00000552162 AGBL2Q5U5Z8 902 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 CORO6Q6QEF8 472 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 PTCHD4Q6ZW05 846 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 VTCN1Q7Z7D3 282 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 ADCK1Q86TW2 530 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 SPRYD4Q8WW59 207 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-209ENST00000552162 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 RASSF4Q9H2L5 321 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 TRIM36Q9NQ86 728 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 VPREB3Q9UKI3 123 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
RAB5C-209ENST00000552162 OOEPA6NGQ2 149 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 PIN1P1O15428 100 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 OR10H3O60404 316 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 NDUFB2O95178 105 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 ACSM4P0C7M7 580 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 CA6P23280 308 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 EGR3Q06889 387 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 MALLQ13021 153 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 PGM2L1Q6PCE3 622 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 PGAP1Q75T13 922 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 BTN2A1Q7KYR7 527 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 OR2T12Q8NG77 320 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 SLCO4A1Q96BD0 722 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 FAM46AQ96IP4 442 aaKnown RBP13.46□□□□□ -0.25
RAB5C-209ENST00000552162 TSSK2Q96PF2 358 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 GPX7Q96SL4 187 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-209ENST00000552162 ADAT1Q9BUB4 502 aaKnown RBP13.46□□□□□ -0.25
RAB5C-209ENST00000552162 SEMA6AQ9H2E6 1030 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 NRIP3Q9NQ35 241 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 ZNRD1Q9P1U0 126 aa13.46□□□□□ -0.25
RAB5C-209ENST00000552162 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 ZNF816-ZNF321PA0A0X1KG74 233 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 BTBD17A6NE02 478 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 F5H5K5 113 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 MRASO14807 208 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 NDUFA2O43678 99 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 FCN3O75636 299 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 TSPAN9O75954 239 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 PTBP3O95758 552 aaKnown RBP13.45□□□□□ -0.26
RAB5C-209ENST00000552162 GYPAP02724 150 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 COQ5Q5HYK3 327 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
RAB5C-209ENST00000552162 Q6ZPA2 131 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 CFAP77Q6ZQR2 320 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 RRM2BQ7LG56 351 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 MRPL21Q7Z2W9 205 aaKnown RBP13.45□□□□□ -0.26
RAB5C-209ENST00000552162 VMO1Q7Z5L0 202 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 SIGLEC7Q9Y286 467 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 TMEM5Q9Y2B1 443 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 NOP16Q9Y3C1 178 aaKnown RBP13.45□□□□□ -0.26
RAB5C-209ENST00000552162 IER3IP1Q9Y5U9 82 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 PLXNB1O43157 2135 aa13.45□□□□□ -0.26
RAB5C-209ENST00000552162 A0A0G2JND7 137 aa13.44□□□□□ -0.26
RAB5C-209ENST00000552162 A0A1B0GVI7 797 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms