RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 GZMKP49863 264 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 RPS7P62081 194 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 GRB2P62993 217 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 MALLQ13021 153 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 CDK5R2Q13319 367 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 TAF13Q15543 124 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 C12orf73Q69YU5 71 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 BBS1Q8NFJ9 593 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 OTOSQ8NHW6 89 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 RNF133Q8WVZ7 376 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 PKP2Q99959 881 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 ABHD6Q9BV23 337 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 MSL2Q9HCI7 577 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 ZNF275Q9NSD4 429 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 CENPMQ9NSP4 180 aa13.11□□□□□ -0.31
PRPF40B-211ENST00000551063 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 SAC3D1A6NKF1 404 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 IQCF6A8MYZ5 107 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 INAFM1C9JVW0 142 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 PRKYO43930 277 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 LILRA1O75019 489 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 APOC1P02654 83 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 TNFSF4P23510 183 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 COL8A2P25067 703 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 EPHA2P29317 976 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 CHN2P52757 468 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 APOFQ13790 326 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 HLXQ14774 488 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 USP51Q70EK9 711 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 PRIMA1Q86XR5 153 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 HPS1Q92902 700 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 OPA3Q9H6K4 179 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
PRPF40B-211ENST00000551063 ZANQ9Y493 2812 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 CCDC182A6NF36 153 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 SELENOFO60613 162 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 CDC14BO60729 498 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 LYNP07948 512 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 IGHV4-31P0DP07 118 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 HSD11B1P28845 292 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 OPRL1P41146 370 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 NAA10P41227 235 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 PRKXP51817 358 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 TNFAIP6P98066 277 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 EFNB1P98172 346 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 GK2Q14410 553 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 OR2T2Q6IF00 324 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 Q6ZR03 302 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 OR8G5Q8NG78 346 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 TMEM163Q8TC26 289 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 ZNF582Q96NG8 517 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 SP140LQ9H930 580 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 S100A14Q9HCY8 104 aa13.09□□□□□ -0.31
PRPF40B-211ENST00000551063 CR1P17927 2039 aa13.08□□□□□ -0.31
PRPF40B-211ENST00000551063 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 CLDN25C9JDP6 229 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 ALPLP05186 524 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 TNFRSF1AP19438 455 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 CX3CR1P49238 355 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 SLC3A1Q07837 685 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 TRIP10Q15642 601 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 HFEQ30201 348 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 AADACL4Q5VUY2 407 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 NXNL2Q5VZ03 156 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 CYB5R2Q6BCY4 276 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 PGAP1Q75T13 922 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 SPATC1Q76KD6 591 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 SLC16A9Q7RTY1 509 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 MRPL21Q7Z2W9 205 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 NAA40Q86UY6 237 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 OR5AS1Q8N127 324 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 TCEANCQ8N8B7 351 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 OR13G1Q8NGZ3 307 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 AMELYQ99218 206 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 SLC30A2Q9BRI3 323 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 IL19Q9UHD0 177 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 JMJD1CQ15652 2540 aa13.08□□□□□ -0.32
PRPF40B-211ENST00000551063 A0A1B0GWJ7 208 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 KIAA1324LA8MWY0 1029 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 EI24O14681 340 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 XRCC2O43543 280 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 ALOX5APP20292 161 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 ALDH3A2P51648 485 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 GID4Q8IVV7 300 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 PQLC1Q8N2U9 271 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 OR2Z1Q8NG97 314 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 CNN2Q99439 309 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 TEAD3Q99594 435 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 LAMP5Q9UJQ1 280 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 ORC6Q9Y5N6 252 aa13.07□□□□□ -0.32
PRPF40B-211ENST00000551063 SONP18583 2426 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms