RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 OR13C3Q8NGS6 347 aa11.03□□□□□ -0.64
CACNB3-217ENST00000550483 OR1F12Q8NHA8 337 aa11.03□□□□□ -0.64
CACNB3-217ENST00000550483 FBXO17Q96EF6 278 aa11.03□□□□□ -0.64
CACNB3-217ENST00000550483 TRIB1Q96RU8 372 aa11.03□□□□□ -0.64
CACNB3-217ENST00000550483 OR2H1Q9GZK4 316 aa11.03□□□□□ -0.64
CACNB3-217ENST00000550483 PPIL3Q9H2H8 161 aaKnown RBP11.03□□□□□ -0.64
CACNB3-217ENST00000550483 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
CACNB3-217ENST00000550483 A0A0G2JK05 382 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 LOC390937A0A1W2PQ73 354 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MBD3L4A6NDZ8 208 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MBD3L3A6NE82 208 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MBD3L5A6NJ08 208 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 IFITM5A6NNB3 132 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 VGLL3A8MV65 326 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 M0R135 149 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 CTDSP2O14595 271 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SYNGR3O43761 229 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MTRF1O75570 445 aaKnown RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 TPPPO94811 219 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 TGM6O95932 706 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 PDGFAP04085 211 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 ACSM4P0C7M7 580 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 CRYGSP22914 178 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SOX2P48431 317 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 ARF1P84077 181 aaKnown RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 GUSBP1Q15486 140 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 PLEKHN1Q494U1 663 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 FAM27D1Q5T7N8 215 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 OTPQ5XKR4 325 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 Q6ZSR3 168 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 PGAP1Q75T13 922 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 LINGO2Q7L985 606 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SERPINA12Q8IW75 414 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 CDH26Q8IXH8 852 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MINDY2Q8NBR6 621 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MBD3L2Q8NHZ7 208 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF799Q96GE5 643 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 PGAM5Q96HS1 289 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 DIRAS2Q96HU8 199 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 BOD1Q96IK1 185 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 OR10A2Q9H208 303 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 NEK6Q9HC98 313 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 MOV10Q9HCE1 1003 aaKnown RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 ABCB9Q9NP78 766 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF275Q9NSD4 429 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 COMMD3Q9UBI1 195 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SPATA2Q9UM82 520 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 SLC5A6Q9Y289 635 aa11.02□□□□□ -0.65
CACNB3-217ENST00000550483 TLN1Q9Y490 2541 aaKnown RBP11.02□□□□□ -0.65
CACNB3-217ENST00000550483 B8ZZF3 427 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 J3QW42 95 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 IGLV3-1P01715 115 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 APOA1P02647 267 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF20P17024 532 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF32P17041 273 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 IGFBP3P17936 291 aaPredicted RBP11.01□□□□□ -0.65
CACNB3-217ENST00000550483 NR4A2P43354 598 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 PRKXP51817 358 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 RIN1Q13671 783 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 CEP78Q5JTW2 689 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 XKRXQ6PP77 449 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 PRSS45Q7RTY3 260 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
CACNB3-217ENST00000550483 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 SKA3Q8IX90 412 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 PLPP7Q8NBV4 271 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 OR5D14Q8NGL3 314 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF671Q8TAW3 534 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 C15orf40Q8WUR7 153 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF837Q96EG3 531 aaPredicted RBP11.01□□□□□ -0.65
CACNB3-217ENST00000550483 DAPK2Q9UIK4 370 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 CLEC4AQ9UMR7 237 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 TP53TG5Q9Y2B4 290 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 NBASA2RRP1 2371 aa11.01□□□□□ -0.65
CACNB3-217ENST00000550483 FABP12A6NFH5 140 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 P2RY10O00398 339 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 DVL2O14641 736 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 UPK1BO75841 260 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 ALX3O95076 343 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 MMP7P09237 267 aaPredicted RBP11□□□□□ -0.65
CACNB3-217ENST00000550483 CD37P11049 281 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 SFTPCP11686 197 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 THBS2P35442 1172 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 TIMP3P35625 211 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 HTR5AP47898 357 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 SLC6A9P48067 706 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 DEFA1P59665 94 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 DEFA3P59666 94 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 PSG4Q00888 419 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 GALK2Q01415 458 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 PLP2Q04941 152 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 FAPQ12884 760 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 C1orf185Q5T7R7 199 aa11□□□□□ -0.65
CACNB3-217ENST00000550483 ZNF324BQ6AW86 544 aaPredicted RBP11□□□□□ -0.65
CACNB3-217ENST00000550483 TFAP2EQ6VUC0 442 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms