RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 DAZAP1Q96EP5 407 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SMIM7Q9BQ49 75 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 LRIT1Q9P2V4 623 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 CHRNA9Q9UGM1 479 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 KCND3Q9UK17 655 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ZFAND5O76080 213 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 PHYHD1Q5SRE7 291 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 ASTLQ6HA08 431 aaPredicted RBP14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 OR8G2PQ6IF36 304 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 MSI2Q96DH6 328 aaKnown RBP14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 SLAMF6Q96DU3 332 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 HDAC8Q9BY41 377 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 UQCC1Q9NVA1 299 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 RNF150Q9ULK6 438 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 PIGLQ9Y2B2 252 aa14.33□□□□□ -0.11
RBFOX1-212ENST00000550418 SPAG17Q6Q759 2223 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 EIF4E2O60573 245 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 ZNF75AQ96N20 296 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 FKRPQ9H9S5 495 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 SLC17A5Q9NRA2 495 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 TRBV11-1A0A0K0K1C0 115 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 RAB27BO00194 218 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 PRAMEF4O60810 478 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 APOA2P02652 100 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 SCGB2A2Q13296 93 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 FAM26DQ5JW98 314 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 KIAA0895LQ68EN5 471 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 GJC3Q8NFK1 279 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 OR51A2Q8NGJ7 313 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 RPUSD4Q96CM3 377 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 SUCNR1Q9BXA5 334 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 MIOXQ9UGB7 285 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 OPN4Q9UHM6 478 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 ACAD8Q9UKU7 415 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 LAMP3Q9UQV4 416 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 C7orf66A4D0T2 115 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 AP4M1O00189 453 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 MGST1P10620 155 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 ZNF85Q03923 595 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 C10orf111Q8N326 155 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 BCL7CQ8WUZ0 217 aaPredicted RBP14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 R4GMQ9 66 aa14.33□□□□□ -0.12
RBFOX1-212ENST00000550418 A0A1W2PPQ1 181 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 SERTM1A2A2V5 107 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 BTBD17A6NE02 478 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 OR5H8P0DN80 308 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 PPP1R1AQ13522 171 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 PLA1AQ53H76 456 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 GPR119Q8TDV5 335 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 FAM3CQ92520 227 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 OR51I2Q9H344 312 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 KIR3DX1Q9H7L2 352 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 LY75O60449 1722 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 ZFC3H1O60293 1989 aaKnown RBP14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 GSTZ1O43708 216 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 PCK2Q16822 640 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 TMEM268Q5VZI3 342 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 OR13D1Q8NGV5 346 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 ZNF775Q96BV0 537 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 MRPL38Q96DV4 380 aaKnown RBP14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 TAF1LQ8IZX4 1826 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 METTL15P1P0C7V9 234 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 DPTQ07507 201 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 MOGAT2Q3SYC2 334 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 ZNF787Q6DD87 383 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 KIRREL2Q6UWL6 708 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 OR52N5Q8NH56 324 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 PRRX2Q99811 253 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 MOB1AQ9H8S9 216 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 GDE1Q9NZC3 331 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 BRWD3Q6RI45 1802 aa14.32□□□□□ -0.12
RBFOX1-212ENST00000550418 CTDSPLO15194 276 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 OPRM1P35372 400 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 RFC3P40938 356 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 SHHQ15465 462 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 MRM1Q6IN84 353 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 GPX8Q8TED1 209 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 RTN4IP1Q8WWV3 396 aaPredicted RBP14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 EMC6Q9BV81 110 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 PPP1R3EQ9H7J1 279 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 DNMT3BQ9UBC3 853 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 CTSFQ9UBX1 484 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 PRSS37A4D1T9 235 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 THBS3P49746 956 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 SLC35A1P78382 337 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 OR8U1Q8NH10 309 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 OR51H1Q8NH63 302 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 OR51B6Q9H340 312 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 PRO1933Q9H354 126 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 PLEKHF2Q9H8W4 249 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 RAB9BQ9NP90 201 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 KIR2DS1A0A191URI9 304 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 SSSCA1O60232 199 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 KIR2DS4P43632 304 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 DUSP3P51452 185 aaPredicted RBP14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 KIR2DS1Q14954 304 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 LPAL2Q16609 132 aa14.31□□□□□ -0.12
RBFOX1-212ENST00000550418 CLEC12BQ2HXU8 276 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms