RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 MXD1Q05195 221 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 PSG5Q15238 335 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 TSC22D1Q15714 1073 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 GABRA6Q16445 453 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 LRRC10Q5BKY1 277 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 PIGGQ5H8A4 983 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 TPTE2P1Q5T6R2 138 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 ANKRD22Q5VYY1 191 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 C6orf89Q6UWU4 347 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 WDR82Q6UXN9 313 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 TMPRSS11AQ6ZMR5 421 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 MBOAT2Q6ZWT7 520 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 COPS6Q7L5N1 327 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 PID1Q7Z2X4 250 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 THOC6Q86W42 341 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 RBM45Q8IUH3 476 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CBLN2Q8IUK8 224 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 C12orf56Q8IXR9 622 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SYCE1Q8N0S2 351 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 VKORC1L1Q8N0U8 176 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 OR4F15Q8NGB8 312 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 OR51F2Q8NH61 342 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SMIM10Q96HG1 83 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 GPR21Q99679 349 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 OR52A5Q9H2C5 316 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SYNDIG1Q9H7V2 258 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CCL28Q9NRJ3 127 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 ZNHIT6Q9NWK9 470 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 ERICH2A1L162 156 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 HIDE1A8MVS5 230 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 H3BNH8 94 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 K7EMT4 169 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 PEX7O00628 323 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 RFXANKO14593 260 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 MPDU1O75352 247 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 SPAG7O75391 227 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TDP2O95551 362 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 HPRT1P00492 218 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 OXTP01178 125 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 BGNP21810 368 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 LCN1P31025 176 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 HRH1P35367 487 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 FGF8P55075 233 aaPredicted RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TAS2R39P59534 338 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TNNC1P63316 161 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 GPR176Q14439 515 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 PSG3Q16557 428 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 SGCAQ16586 387 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 COA6Q5JTJ3 125 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 C6orf183Q5T699 404 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 LCN12Q6JVE5 192 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 RWDD4Q6NW29 188 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TEX43Q6ZNM6 134 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 COMTD1Q86VU5 262 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 KIF2BQ8N4N8 673 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 NOXO1Q8NFA2 376 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 NPBQ8NG41 125 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 FANK1Q8TC84 345 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 ACER1Q8TDN7 264 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 GEMIN6Q8WXD5 167 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 BAALCQ8WXS3 180 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 CACNG8Q8WXS5 425 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 NDRG1Q92597 394 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TMEM230Q96A57 120 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 RPEQ96AT9 228 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 SEH1LQ96EE3 360 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 RNF170Q96K19 258 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 COL21A1Q96P44 957 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 MICU1Q9BPX6 476 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF2Q9BSG1 426 aaPredicted RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 CHID1Q9BWS9 393 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 MAP1LC3CQ9BXW4 147 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 NAA50Q9GZZ1 169 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 ARMC7Q9H6L4 198 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TREM1Q9NP99 234 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 KCNJ16Q9NPI9 418 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 TMEM9BQ9NQ34 198 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 ST3GAL6Q9Y274 331 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 RBMX2Q9Y388 322 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 DHX57Q6P158 1386 aaKnown RBP1.98□□□□□ -2.09
CCDC38-208ENST00000549876 CEMIPQ8WUJ3 1361 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 JCADQ9P266 1359 aa1.98□□□□□ -2.09
CCDC38-208ENST00000549876 FBN1P35555 2871 aaKnown RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 CENPJQ9HC77 1338 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 RAB19A4D1S5 217 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 NCBP2LA6PVI3 153 aaKnown RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 IQCF5A8MTL0 148 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 XKRYO14609 159 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ENTPD5O75356 428 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 PLEKHA8P1O95397 391 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 YEATS4O95619 227 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 RAB3DO95716 219 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF14P17017 642 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ATF6P18850 670 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 CSNK2A2P19784 350 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 RAB5AP20339 215 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 SERPINB8P50452 374 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 FABP6P51161 128 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 RND2P52198 227 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms