RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 G6PC2Q9NQR9 355 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 OR5AC2Q9NZP5 309 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 RAB22AQ9UL26 194 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 TRIOO75962 3097 aa12.26□□□□□ -0.45
HDAC7-228ENST00000548938 TRAV36DV7A0A075B6V5 113 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 NUDT19A8MXV4 375 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 P2RY10O00398 339 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 CLDN4O14493 209 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 ADAP1O75689 374 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 IL33O95760 270 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 IFNA6P05013 189 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 HOXB2P14652 356 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 RAB6AP20340 208 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 SLC29A4Q7RTT9 530 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 OR2I1PQ8NGU4 316 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 GAS2L1Q99501 681 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-228ENST00000548938 NMES1Q9C002 83 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 DHCR7Q9UBM7 475 aaKnown RBP12.25□□□□□ -0.45
HDAC7-228ENST00000548938 PRODH2Q9UF12 536 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 OR52A1Q9UKL2 312 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 EDARQ9UNE0 448 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 COA3Q9Y2R0 106 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-228ENST00000548938 PIAS3Q9Y6X2 628 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 ARPC4-TTLL3A0A0A6YYG9 625 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 SSX5O60225 188 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 ICOSLGO75144 302 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 RBM39Q14498 530 aaKnown RBP12.25□□□□□ -0.45
HDAC7-228ENST00000548938 SGCAQ16586 387 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 PRTGQ2VWP7 1150 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 LINC00346Q8IVM7 164 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 NANPQ8TBE9 248 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 CYYR1Q96J86 154 aa12.25□□□□□ -0.45
HDAC7-228ENST00000548938 VSX1Q9NZR4 365 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-228ENST00000548938 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 C17orf105B2RV13 164 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 NUDT14O95848 222 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 CX3CR1P49238 355 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 SNRPEP62304 92 aaKnown RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 HABP2Q14520 560 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 SLC9A3R2Q15599 337 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 ZNF542PQ5EBM4 170 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 MAMDC2Q7Z304 686 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 LILRB2Q8N423 598 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 FRMD1Q8N878 549 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 NKAIN3Q8N8D7 197 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 OR52N4Q8NGI2 321 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 COLCA2A8K830 154 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 C2CD4DB7Z1M9 353 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 VSIG8P0DPA2 414 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 PEA15Q15121 130 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 SMAD2Q15796 467 aaKnown RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 SGCBQ16585 318 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 COL13A1Q5TAT6 717 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 DRAM2Q6UX65 266 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 ETV3LQ6ZN32 361 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 SLC16A13Q7RTY0 426 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 C19orf47Q8N9M1 422 aaKnown RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 FGGYQ96C11 551 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 TMEM184BQ9Y519 407 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 TMEM269A0A1B0GVZ9 245 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 SFTA3P0C7M3 94 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 CBR1P16152 277 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 ELAVL1Q15717 326 aaKnown RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 RBMS3Q6XE24 437 aaKnown RBP12.24□□□□□ -0.45
HDAC7-228ENST00000548938 NUP54Q7Z3B4 507 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 DCXRQ7Z4W1 244 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 OR51F2Q8NH61 342 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 NUBPLQ8TB37 319 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 TXNIPQ9H3M7 391 aa12.24□□□□□ -0.45
HDAC7-228ENST00000548938 TNRC18O15417 2968 aaPredicted RBP12.23□□□□□ -0.45
HDAC7-228ENST00000548938 FAM221BA6H8Z2 402 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 AGPAT2O15120 278 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 PI3P19957 117 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 IGFBP4P22692 258 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 GNALP38405 381 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 LPAR6P43657 344 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 CAV2P51636 162 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 QRFPP83859 136 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 GLO1Q04760 184 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 SKA3Q8IX90 412 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 KDM8Q8N371 416 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 OR4K15Q8NH41 348 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 ADAMTS17Q8TE56 1095 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 MMABQ96EY8 250 aaPredicted RBP12.23□□□□□ -0.45
HDAC7-228ENST00000548938 NICN1Q9BSH3 213 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 NRSN2Q9GZP1 204 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 LAT2Q9GZY6 243 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 CD207Q9UJ71 328 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 PCDHGA1Q9Y5H4 931 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 CDC14CA4D256 554 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 TNFRSF10CO14798 259 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 MBTPS2O43462 519 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 ISG15P05161 165 aa12.23□□□□□ -0.45
HDAC7-228ENST00000548938 HNRNPA2B1P22626 353 aaKnown RBP12.23□□□□□ -0.45
HDAC7-228ENST00000548938 NPY4RP50391 375 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms