RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 LRP12Q9Y561 859 aa4.41□□□□□ -1.7
AC078880.2-201ENST00000547948 PCSK5Q92824 1860 aa4.41□□□□□ -1.7
AC078880.2-201ENST00000547948 A0A075B6Q4 140 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TRAV1-2A0A0B4J238 106 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 A0A1B0GVI7 797 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TMEM269A0A1B0GVZ9 245 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TMEM8BA6NDV4 472 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ANKRD61A6NGH8 418 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ACOD1A6NK06 481 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 AHRRA9YTQ3 701 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZNF814B7Z6K7 855 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RGS5O15539 181 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SLC19A2O60779 497 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RAMP1O60894 148 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 WDR1O75083 606 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SS18L1O75177 396 aaPredicted RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RPP14O95059 124 aaKnown RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ABHD16AO95870 558 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 LALBAP00709 142 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 YES1P07947 543 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ERCC1P07992 297 aaPredicted RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 HOXD4P09016 255 aaPredicted RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CST2P09228 141 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RAB3BP20337 219 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ACHEP22303 614 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PAX7P23759 505 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SDC2P34741 201 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TALDO1P37837 337 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CD79BP40259 229 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 OPRL1P41146 370 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 STARP49675 285 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CAPZA1P52907 286 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PPP3R1P63098 170 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PMP22Q01453 160 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZNF45Q02386 682 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TGFBR3Q03167 851 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RBPJQ06330 500 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 HNRNPA0Q13151 305 aaKnown RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RAB35Q15286 201 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ETFDHQ16134 617 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SGCAQ16586 387 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SLC36A2Q495M3 483 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ACSM3Q53FZ2 586 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 KRTCAP3Q53RY4 240 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZMAT1Q5H9K5 638 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZNF684Q5T5D7 378 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZNF585AQ6P3V2 769 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 C16orf87Q6PH81 154 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SLC16A14Q7RTX9 510 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CEACAM19Q7Z692 300 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 COMMD2Q86X83 199 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 LINC00346Q8IVM7 164 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 UBE2J2Q8N2K1 259 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RFLNBQ8N5W9 214 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 NKAIN3Q8N8D7 197 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TEX19Q8NA77 164 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 OR2G2Q8NGZ5 317 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 FNDC9Q8TBE3 224 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TBC1D15Q8TC07 691 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ST7LQ8TDW4 575 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ROBO4Q8WZ75 1007 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 FAM122AQ96E09 287 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CPNE2Q96FN4 548 aaPredicted RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 WDYHV1Q96HA8 205 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZNF845Q96IR2 970 aaPredicted RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZFP3Q96NJ6 502 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 FOXN4Q96NZ1 517 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TIMP4Q99727 224 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ATF6BQ99941 703 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SYT3Q9BQG1 590 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SLIRPQ9GZT3 109 aaKnown RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CALHM2Q9HA72 323 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PLEKHA1Q9HB21 404 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PLGRKTQ9HBL7 147 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CRLF2Q9HC73 371 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CENPMQ9NSP4 180 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 DDX28Q9NUL7 540 aaKnown RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 TMEM38BQ9NVV0 291 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PLEK2Q9NYT0 353 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 SPRR3Q9UBC9 169 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RABL2AQ9UBK7 228 aaPredicted RBP4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 PRSS50Q9UI38 385 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 ZNF391Q9UJN7 358 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 OR52A1Q9UKL2 312 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 FBXL3Q9UKT7 428 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 HHLA2Q9UM44 414 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 RABL2BQ9UNT1 228 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 KLHDC2Q9Y2U9 406 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 GRIP1Q9Y3R0 1128 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CMAHPQ9Y471 501 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 LIPGQ9Y5X9 500 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 FREM2Q5SZK8 3169 aa4.4□□□□□ -1.71
AC078880.2-201ENST00000547948 CPAMD8Q8IZJ3 1885 aa4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 SPTBP11277 2137 aa4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 ZFHX2Q9C0A1 2572 aaPredicted RBP4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 IGKV1D-43A0A0B4J1Z2 117 aa4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 LOC107986453A0A1B0GWG9 222 aa4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 OR6C6A6NF89 314 aa4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 ANXA2P2A6NMY6 339 aa4.39□□□□□ -1.71
AC078880.2-201ENST00000547948 E9PI62 339 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms