RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ARFIP1P53367 373 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 PPP1CBP62140 327 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 RPS11P62280 158 aaKnown RBP eCLIP0.94□□□□□ -2.26
CEP290-204ENST00000547926 FLI1Q01543 452 aaPredicted RBP0.94□□□□□ -2.26
CEP290-204ENST00000547926 BST1Q10588 318 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 FUT5Q11128 374 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 OR7A5Q15622 319 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 TCEAL5Q5H9L2 206 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 TMEM136Q6ZRR5 245 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 ZCCHC7Q8N3Z6 543 aaKnown RBP0.94□□□□□ -2.26
CEP290-204ENST00000547926 EIF1ADQ8N9N8 165 aaKnown RBP0.94□□□□□ -2.26
CEP290-204ENST00000547926 TCEAL3Q969E4 200 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 TRIM44Q96DX7 344 aaPredicted RBP0.94□□□□□ -2.26
CEP290-204ENST00000547926 WDR34Q96EX3 536 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 GGTLC1Q9BX51 225 aa0.94□□□□□ -2.26
CEP290-204ENST00000547926 USP9YO00507 2555 aaPredicted RBP0.93□□□□□ -2.26
CEP290-204ENST00000547926 SHANK3Q9BYB0 1731 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 ZSWIM8A7E2V4 1837 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 A0A1B0GW55 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 LRRIQ3A6PVS8 624 aaPredicted RBP0.93□□□□□ -2.26
CEP290-204ENST00000547926 GABRR3A8MPY1 467 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 SLC22A5O76082 557 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 CST1P01037 141 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 PABPC4LP0CB38 370 aaKnown RBP0.93□□□□□ -2.26
CEP290-204ENST00000547926 DUX4L2P0CJ85 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 DUX4L3P0CJ86 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 DUX4L5P0CJ88 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 DUX4L6P0CJ89 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 DUX4L7P0CJ90 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 CD37P11049 281 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 MX1P20591 662 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 GFERP55789 205 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 PRR3P79522 188 aaKnown RBP0.93□□□□□ -2.26
CEP290-204ENST00000547926 FAM53BQ14153 422 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 GPR107Q5VW38 600 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 STUMQ69YW2 141 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 COX18Q8N8Q8 333 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 PRELID2Q8N945 189 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 C11orf72Q8NBR9 251 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 APCDD1LQ8NCL9 501 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 OR2A1Q8NGT9 310 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 KLF14Q8TD94 323 aaPredicted RBP0.93□□□□□ -2.26
CEP290-204ENST00000547926 CCDC126Q96EE4 140 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 ZFP3Q96NJ6 502 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 COL21A1Q96P44 957 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 IP6K3Q96PC2 410 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 SLC29A1Q99808 456 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 MICU1Q9BPX6 476 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 RHOXF2Q9BQY4 288 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 EXOSC4Q9NPD3 245 aaKnown RBP0.93□□□□□ -2.26
CEP290-204ENST00000547926 DUX4Q9UBX2 424 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 NUP50Q9UKX7 468 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 PRR14LQ5THK1 2151 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 STRCQ7RTU9 1775 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 FREM2Q5SZK8 3169 aa0.93□□□□□ -2.26
CEP290-204ENST00000547926 SORL1Q92673 2214 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 GVINP1Q7Z2Y8 2422 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 IGHV3-72A0A0B4J1Y9 119 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 IGHV7-4-1A0A0J9YVY3 117 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 KRBOX1C9JBD0 128 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 NDUFC2-KCTD14E9PQ53 114 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 H7C417 338 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 RAB29O14966 203 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 CYB5R3P00387 301 aaPredicted RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 ACSM4P0C7M7 580 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 TMED10P49755 219 aaKnown RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 VSX2P58304 361 aaPredicted RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 RPL23P62829 140 aaKnown RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 PRKCDQ05655 676 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 TGM3Q08188 693 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 LRRC23Q53EV4 343 aaPredicted RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 TEX30Q5JUR7 227 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 SASS6Q6UVJ0 657 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 NKAIN4Q8IVV8 208 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 ZNF664Q8N3J9 261 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 TEX9Q8N6V9 391 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 NPWQ8N729 165 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 RSG1Q9BU20 258 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 SAMD10Q9BYL1 202 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 FRMD8P1Q9BZ68 369 aaPredicted RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 NEUROG2Q9H2A3 272 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 ZSCAN16Q9H4T2 348 aaPredicted RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 HYPKQ9NX55 129 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 MTFP1Q9UDX5 166 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 PISDQ9UG56 409 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 ISY1Q9ULR0 285 aaKnown RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 MMACHCQ9Y4U1 282 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 CSDC2Q9Y534 153 aaKnown RBP0.92□□□□□ -2.26
CEP290-204ENST00000547926 PALLDQ8WX93 1383 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 TENM2Q9NT68 2774 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 AKAP13Q12802 2813 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 LRRC7Q96NW7 1537 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 MTORP42345 2549 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 DMDP11532 3685 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 TRAV6A0A075B6T7 132 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 OR5H1A6NKK0 313 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 PALMO75781 387 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 FRYLO94915 3013 aa0.92□□□□□ -2.26
CEP290-204ENST00000547926 SEMA3DO95025 777 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms