RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 TMEM38BQ9NVV0 291 aa6.76□□□□□ -1.33
KDM1B-203ENST00000546309 CLCF1Q9UBD9 225 aa6.76□□□□□ -1.33
KDM1B-203ENST00000546309 Q9UFV3 132 aa6.76□□□□□ -1.33
KDM1B-203ENST00000546309 NOSIPQ9Y314 301 aaKnown RBP6.76□□□□□ -1.33
KDM1B-203ENST00000546309 GRIP1Q9Y3R0 1128 aa6.76□□□□□ -1.33
KDM1B-203ENST00000546309 LRP12Q9Y561 859 aa6.76□□□□□ -1.33
KDM1B-203ENST00000546309 TRBV5-7A0A0A0MS05 114 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PNMA8CA0A1B0GUJ8 204 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 TMEM269A0A1B0GVZ9 245 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 SHISA3A0PJX4 238 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CD8B2A6NJW9 211 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 SLC22A20A6NK97 555 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CLDN25C9JDP6 229 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 SS18L1O75177 396 aaPredicted RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PNPP00491 289 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CRHP06850 196 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 H2BFMP0C1H6 154 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 HOXB4P17483 251 aaPredicted RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ACHEP22303 614 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 APEX1P27695 318 aaKnown RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CD40LGP29965 261 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 S100A5P33763 92 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PSMB10P40306 273 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 RPS27P42677 84 aaKnown RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 KIR3DL2P43630 455 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PCBD1P61457 104 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ZNF45Q02386 682 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 SRYQ05066 204 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 SCRN3Q0VDG4 424 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PMPCAQ10713 525 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ZNF846Q147U1 533 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 WDR38Q5JTN6 314 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 TMEM244Q5VVB8 128 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 OR2A2Q6IF42 318 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 Q6ZSR3 168 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ABHD12BQ7Z5M8 362 aaPredicted RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CCDC190Q86UF4 302 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 TUSC5Q8IXB3 177 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ELMOD2Q8IZ81 293 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 OR5M9Q8NGP3 310 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 HSD17B8Q92506 261 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 RGP1Q92546 391 aaPredicted RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 NINJ1Q92982 152 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 LRRC46Q96FV0 321 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CMTM3Q96MX0 182 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 DERL3Q96Q80 235 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 KCNJ15Q99712 375 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 FOXB1Q99853 325 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 FOXC2Q99958 501 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PDCD1LG2Q9BQ51 273 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ZNF416Q9BWM5 594 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 RBM24Q9BX46 236 aaKnown RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PRRG4Q9BZD6 226 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PPIL3Q9H2H8 161 aaKnown RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CRLF2Q9HC73 371 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 SNTG1Q9NSN8 517 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 FAM206AQ9NX38 181 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 ASH2LQ9UBL3 628 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 NUFIP1Q9UHK0 495 aaKnown RBP6.75□□□□□ -1.33
KDM1B-203ENST00000546309 TLN2Q9Y4G6 2542 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 CSPG4Q6UVK1 2322 aa6.75□□□□□ -1.33
KDM1B-203ENST00000546309 A0A0G2JK05 382 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 FIGNL2A6NMB9 653 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 NOTOA8MTQ0 251 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 PSMD9O00233 223 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 PDCD5O14737 125 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 CASKO14936 926 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 PIN1P1O15428 100 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 RPP14O95059 124 aaKnown RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 FARS2O95363 451 aaKnown RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 TGM6O95932 706 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 IGLV3-1P01715 115 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 UBCP0CG48 685 aaKnown RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 COX5BP10606 129 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 HOXB1P14653 301 aaPredicted RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 GABRA1P14867 456 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 SRMP19623 302 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 CCL1P22362 96 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 MYL9P24844 172 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 PTBP1P26599 531 aaKnown RBP eCLIP6.74□□□□□ -1.332e-6■■■■□ 26
KDM1B-203ENST00000546309 CALRP27797 417 aaKnown RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 CDAP32320 146 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 OR3A2P47893 321 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 SCAND1P57086 179 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 PSMA6P60900 246 aaKnown RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 DCTN2Q13561 401 aaKnown RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 SGCAQ16586 387 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 CEACAM16Q2WEN9 425 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 HSD17B12Q53GQ0 312 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 CCDC92Q53HC0 331 aaPredicted RBP6.74□□□□□ -1.33
KDM1B-203ENST00000546309 CEP78Q5JTW2 689 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 ELFN2Q5R3F8 820 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 C1QTNF12Q5T7M4 302 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 TSPO2Q5TGU0 170 aa6.74□□□□□ -1.33
KDM1B-203ENST00000546309 NSUN5P2Q63ZY6 315 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms