RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TNFSF11O14788 317 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 BCKDKO14874 412 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF354AO60765 605 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 HSBP1O75506 76 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 IGHV2-5P01817 119 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SEMG1P04279 462 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 STAG3L2P0CL84 134 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF3P17036 446 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 COX7A1P24310 79 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SHC1P29353 583 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 LONP1P36776 959 aaKnown RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 TFPI2P48307 235 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SUB1P53999 127 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 GPX6P59796 221 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SNAP25P60880 206 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 RAD51Q06609 339 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 TWF1Q12792 350 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ILKQ13418 452 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 CYTH1Q15438 398 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 PSMD5Q16401 504 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 LY6G6FQ5SQ64 297 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SPINK14Q6IE38 97 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 OR52W1Q6IF63 320 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 C17orf82Q86X59 251 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF557Q8N988 423 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF740Q8NDX6 193 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 TMEM104Q8NE00 496 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 KLHL30-AS1Q8NEE0 82 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 CCDC54Q8NEL0 328 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 PROKR2Q8NFJ6 384 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 OR9G4Q8NGQ1 327 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 LYPD6BQ8NI32 183 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 CAPSLQ8WWF8 208 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 MSANTD3Q96H12 275 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 KCNA7Q96RP8 456 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF184Q99676 751 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 RARRES2Q99969 163 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 OR51M1Q9H341 326 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 EHD1Q9H4M9 534 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZDHHC11Q9H8X9 412 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 PARVBQ9HBI1 364 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SLC7A10Q9NS82 523 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 AIG1Q9NVV5 245 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 MARCH5Q9NX47 278 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 EMC3Q9P0I2 261 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 MYEF2Q9P2K5 600 aaKnown RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 KIF25Q9UIL4 384 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 GNPTGQ9UJJ9 305 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ING4Q9UNL4 249 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 BZW2Q9Y6E2 419 aaKnown RBP3.17□□□□□ -1.9
SNHG1-217ENST00000541578 SDK1Q7Z5N4 2213 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
SNHG1-217ENST00000541578 LAMA1P25391 3075 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 THADAQ6YHU6 1953 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PDCD11Q14690 1871 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 IGKV1D-8A0A087WSZ0 117 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 TRBV9A0A0B4J1U6 114 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 A0A1W2PPR1 153 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 TMEM120BA0PK00 339 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 HAT1O14929 419 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 AIREO43918 545 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 EIF3GO75821 320 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CSTAP01040 98 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ACSM4P0C7M7 580 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PNMA6AP0CW24 399 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 FOLR2P14207 255 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PTNP21246 168 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CSRP1P21291 193 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 GABRR1P24046 479 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 HOXA6P31267 233 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 HAAOP46952 286 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PSMD4P55036 377 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 DIO3P55073 304 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 DAOAP59103 153 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 TAS2R19P59542 299 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 MRPS15P82914 257 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF45Q02386 682 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ACVR1Q04771 509 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PRPSAP1Q14558 356 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ALX1Q15699 326 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 SNCBQ16143 134 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 BCL2A1Q16548 175 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 EOGTQ5NDL2 527 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 C1orf100Q5SVJ3 147 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 SPESP1Q6UW49 350 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 SCARA5Q6ZMJ2 495 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF620Q6ZNG0 422 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 FAM220AQ7Z4H9 259 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 TMEM135Q86UB9 458 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 LHFPL3Q86UP9 236 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CDC20BQ86Y33 519 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ZBED8Q8IZ13 594 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 SLC39A11Q8N1S5 342 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PQLC3Q8N755 202 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF525Q8N782 197 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 INO80EQ8NBZ0 244 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CA5BP1Q8WTZ4 195 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 GTSF1Q8WW33 167 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms