RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MRPS18AQ9NVS2 196 aaKnown RBP13.3□□□□□ -0.28
DDB1-218ENST00000540784 PTTG3PQ9NZH4 202 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 TAAR3PQ9P1P4 343 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 IKZF2Q9UKS7 526 aa13.3□□□□□ -0.28
DDB1-218ENST00000540784 RTTNQ86VV8 2226 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 DAPL1A0PJW8 107 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 FADS2O95864 444 aaKnown RBP13.29□□□□□ -0.28
DDB1-218ENST00000540784 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 ANXA2P07355 339 aaKnown RBP13.29□□□□□ -0.28
DDB1-218ENST00000540784 SLC2A1P11166 492 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 CDKN1AP38936 164 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 MPV17P39210 176 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 RIDAP52758 137 aaKnown RBP13.29□□□□□ -0.28
DDB1-218ENST00000540784 ACTC1P68032 377 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 ACTA1P68133 377 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 RAB40BQ12829 278 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 PSG7Q13046 419 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 ACBD7Q8N6N7 88 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 SNX33Q8WV41 574 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 VRK1Q99986 396 aaPredicted RBP13.29□□□□□ -0.28
DDB1-218ENST00000540784 TTTY10Q9BZA0 68 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 MS4A5Q9H3V2 200 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 DYNLRB1Q9NP97 96 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 BRD7Q9NPI1 651 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 ZNF701Q9NV72 531 aaPredicted RBP13.29□□□□□ -0.28
DDB1-218ENST00000540784 LRP12Q9Y561 859 aa13.29□□□□□ -0.28
DDB1-218ENST00000540784 IGLV3-9A0A075B6K5 115 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 J3QRE1 110 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 MAGEB4O15481 346 aaPredicted RBP13.28□□□□□ -0.28
DDB1-218ENST00000540784 KRT8P05787 483 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 ADRA2AP08913 450 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 RAC2P15153 192 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 PAX1P15863 534 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 DCTDP32321 178 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 ZNF121P58317 390 aaPredicted RBP13.28□□□□□ -0.28
DDB1-218ENST00000540784 HLXQ14774 488 aaPredicted RBP13.28□□□□□ -0.28
DDB1-218ENST00000540784 NKPD1Q17RQ9 610 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 SNAI3Q3KNW1 292 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 FBXW12Q6X9E4 464 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 PLEKHG7Q6ZR37 379 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 RFLNBQ8N5W9 214 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 OR52H1Q8NGJ2 320 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 PGAM5Q96HS1 289 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
DDB1-218ENST00000540784 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
DDB1-218ENST00000540784 ITGB1BP2Q9UKP3 347 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 SPG11Q96JI7 2443 aa13.28□□□□□ -0.28
DDB1-218ENST00000540784 RAI1Q7Z5J4 1906 aaPredicted RBP13.27□□□□□ -0.28
DDB1-218ENST00000540784 TMEM269A0A1B0GVZ9 245 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 IRGMA1A4Y4 181 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 METTL15A6NJ78 407 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 ACOD1A6NK06 481 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 PRR32B1ATL7 298 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 H7C417 338 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 M0R233 179 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 TBX1O43435 398 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 TIMM8AO60220 97 aaPredicted RBP13.27□□□□□ -0.29
DDB1-218ENST00000540784 SULT1C4O75897 302 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 MT-ND5P03915 603 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 TACSTD2P09758 323 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 LIPAP38571 399 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 ALDH3B1P43353 468 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 PTH2RP49190 550 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 PPOXP50336 477 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 ATP5J2P56134 94 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 ZNF85Q03923 595 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 SSX6Q7RTT6 188 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 KCTD20Q7Z5Y7 419 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 LRRC75A-AS1Q8N1F1 130 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 YIPF7Q8N8F6 280 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 OR52I1Q8NGK6 324 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 SGK3Q96BR1 496 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 PERPQ96FX8 193 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 MRPL48Q96GC5 212 aaKnown RBP13.27□□□□□ -0.29
DDB1-218ENST00000540784 FOXC2Q99958 501 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 GSX2Q9BZM3 304 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 RAB1BQ9H0U4 201 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 OR10A2Q9H208 303 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 RASSF4Q9H2L5 321 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 MRM2Q9UI43 246 aaKnown RBP13.27□□□□□ -0.29
DDB1-218ENST00000540784 PURGQ9UJV8 347 aaKnown RBP13.27□□□□□ -0.29
DDB1-218ENST00000540784 DSCAMO60469 2012 aa13.27□□□□□ -0.29
DDB1-218ENST00000540784 PLSCR5A0PG75 271 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 ERCC1P07992 297 aaPredicted RBP13.26□□□□□ -0.29
DDB1-218ENST00000540784 NAT2P11245 290 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 SELEP16581 610 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 KITLGP21583 273 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 ART1P52961 327 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 CSNK2BP67870 215 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 ZNF92Q03936 586 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 GK2Q14410 553 aaPredicted RBP13.26□□□□□ -0.29
DDB1-218ENST00000540784 SNCBQ16143 134 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 ZNF829Q3KNS6 432 aaPredicted RBP13.26□□□□□ -0.29
DDB1-218ENST00000540784 GLYATL3Q5SZD4 288 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 PRSS45Q7RTY3 260 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 MRPL21Q7Z2W9 205 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms