RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 B3GAT2Q9NPZ5 323 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 SLC17A5Q9NRA2 495 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 TMEM38BQ9NVV0 291 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 IKZF2Q9UKS7 526 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 SSR3Q9UNL2 185 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 LRP12Q9Y561 859 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 RAI1Q7Z5J4 1906 aaPredicted RBP9.23□□□□□ -0.93
ATL3-204ENST00000540699 RTTNQ86VV8 2226 aa9.23□□□□□ -0.93
ATL3-204ENST00000540699 VPS13CQ709C8 3753 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ITPR3Q14573 2671 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ARPC4-TTLL3A0A0A6YYG9 625 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 CIB4A0PJX0 185 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 GPRIN2O60269 458 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 TMCC2O75069 709 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ZNF254O75437 659 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 RAD51DO75771 328 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 KRT33AO76009 404 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 HOXB1P14653 301 aaPredicted RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 NPR2P20594 1047 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 GDI2P50395 445 aaKnown RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 RIDAP52758 137 aaKnown RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 KRTAP10-9P60411 292 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 RPS11P62280 158 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATL3-204ENST00000540699 SLC3A1Q07837 685 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ALKBH1Q13686 389 aaKnown RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 CEACAM16Q2WEN9 425 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 NRN1LQ496H8 165 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 FAM27BQ5VT28 67 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ANKRD16Q6P6B7 361 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 CFAP77Q6ZQR2 320 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 RHOUQ7L0Q8 258 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 MS4A15Q8N5U1 240 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 WDR31Q8NA23 367 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 KBTBD8Q8NFY9 601 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 OR2G2Q8NGZ5 317 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 RGP1Q92546 391 aaPredicted RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 GHSRQ92847 366 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 SLAMF6Q96DU3 332 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 C4orf45Q96LM5 186 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 FOXB1Q99853 325 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 MROQ9BYG7 248 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 SIAEQ9HAT2 523 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 EXOSC4Q9NPD3 245 aaKnown RBP9.22□□□□□ -0.93
ATL3-204ENST00000540699 OBP2BQ9NPH6 170 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 FRRS1LQ9P0K9 344 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ASH2LQ9UBL3 628 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 ITGB1BP2Q9UKP3 347 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 SLC25A15Q9Y619 301 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 PMF1-BGLAPU3KQ54 211 aa9.22□□□□□ -0.93
ATL3-204ENST00000540699 TRBV2A0A0J9YWF9 115 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 OR4C45A6NMZ5 311 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 A6NNC1 897 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 DEFB108AA8MXU0 73 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 SIAH2O43255 324 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 RPP14O95059 124 aaKnown RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 PNPP00491 289 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 CST2P09228 141 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 PAX7P23759 505 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 LOXP28300 417 aaPredicted RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 DCTDP32321 178 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 KIR3DL2P43630 455 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 SERPINB10P48595 397 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 CCR9P51686 369 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 TUBA1BP68363 451 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 ARF1P84077 181 aaKnown RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 MFGE8Q08431 387 aaPredicted RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 INSL4Q14641 139 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 TESK1Q15569 626 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 SGCAQ16586 387 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 TBRG1Q3YBR2 411 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 WDR38Q5JTN6 314 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 C22orf42Q6IC83 251 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 UNQ9370/PRO34162Q6UXP9 181 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 TUBA1AQ71U36 451 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 SPATC1Q76KD6 591 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 KRT77Q7Z794 578 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 CATSPERDQ86XM0 798 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 PRSS35Q8N3Z0 413 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 IL17RDQ8NFM7 739 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 OR13C5Q8NGS8 318 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 ABHD4Q8TB40 342 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 TSC22D3Q99576 134 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 PDCD1LG2Q9BQ51 273 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 CDADC1Q9BWV3 514 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 SLIRPQ9GZT3 109 aaKnown RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 DDX28Q9NUL7 540 aaKnown RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 CCDC59Q9P031 241 aaKnown RBP9.21□□□□□ -0.94
ATL3-204ENST00000540699 FBXL3Q9UKT7 428 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 POLR1DQ9Y2S0 133 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 AMDHD2Q9Y303 409 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 R4GMQ9 66 aa9.21□□□□□ -0.94
ATL3-204ENST00000540699 SHISA3A0PJX4 238 aa9.2□□□□□ -0.94
ATL3-204ENST00000540699 TMEM212A6NML5 194 aa9.2□□□□□ -0.94
ATL3-204ENST00000540699 ZNF878C9JN71 531 aa9.2□□□□□ -0.94
ATL3-204ENST00000540699 RER1O15258 196 aa9.2□□□□□ -0.94
ATL3-204ENST00000540699 CTAG2O75638 210 aa9.2□□□□□ -0.94
ATL3-204ENST00000540699 ZFPL1O95159 310 aa9.2□□□□□ -0.94
ATL3-204ENST00000540699 IL1AP01583 271 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms