RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CLUP10909 449 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 LYL1P12980 280 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 CPMP14384 443 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ZBTB25P24278 435 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 S100PP25815 95 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 TACR3P29371 465 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 TSPAN7P41732 249 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 GSK3AP49840 483 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RAB5BP61020 215 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RPS4XP62701 263 aaKnown RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 UBE2IP63279 158 aaKnown RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 PJVKQ0ZLH3 352 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RAB11BQ15907 218 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF141Q15928 474 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RPE65Q16518 533 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF750Q32MQ0 723 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 DCAF12L2Q5VW00 463 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 LIPNQ5VXI9 398 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 FCRL6Q6DN72 434 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RAB12Q6IQ22 244 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 EIF5AL1Q6IS14 154 aaKnown RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 TAF8Q7Z7C8 310 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 HMGN2P46Q86SG4 172 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 VASH2Q86V25 355 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 CDC20BQ86Y33 519 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 GTPBP8Q8N3Z3 284 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 C2orf73Q8N5S3 287 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 CYB561A3Q8NBI2 242 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 AGBL5Q8NDL9 886 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SDR9C7Q8NEX9 313 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 STEAP2Q8NFT2 490 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 OR2L3Q8NG85 312 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 OR51S1Q8NGJ8 323 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 THAP6Q8TBB0 222 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 DUSP19Q8WTR2 217 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 MITD1Q8WV92 249 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ASB17Q8WXJ9 295 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RSC1A1Q92681 617 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 TSACCQ96A04 125 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SLC22A18Q96BI1 424 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ZBTB8AQ96BR9 441 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SEH1LQ96EE3 360 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 PRRT1Q99946 306 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 VRK1Q99986 396 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF251Q9BRH9 671 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ZPBPQ9BS86 351 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 COMMD4Q9H0A8 199 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 KIR3DX1Q9H7L2 352 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SMCO4Q9NRQ5 59 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SPHK1Q9NYA1 384 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ASH2LQ9UBL3 628 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 FBXL4Q9UKA2 621 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ERVK-19Q9WJR5 959 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RELNP78509 3460 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 TRAV27A0A087WT01 109 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 A0A087WUJ7 227 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 METTL21EPA6NDL7 271 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 TVP23AA6NH52 213 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 C4orf51C9J302 202 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 SULT2B1O00204 365 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 TAAR5O14804 337 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 LDB3O75112 727 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 GPR75O95800 540 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF735P0CB33 412 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 C8orf89P0DMQ9 161 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 FUT1P19526 365 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 WT1P19544 449 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-204ENST00000539847 CERS1P27544 350 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 PSMB5P28074 263 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 CD34P28906 385 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 BDKRB2P30411 391 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 RPL35P42766 123 aaKnown RBP6.84□□□□□ -1.31
CCDC60-204ENST00000539847 CX3CR1P49238 355 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 AKR1D1P51857 326 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 LUMP51884 338 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-204ENST00000539847 NANOS3P60323 173 aaKnown RBP6.84□□□□□ -1.31
CCDC60-204ENST00000539847 BTN3A2P78410 334 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 CDK3Q00526 305 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 ECH1Q13011 328 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 SRSF6Q13247 344 aaKnown RBP6.84□□□□□ -1.31
CCDC60-204ENST00000539847 SERTAD2Q14140 314 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 GRM7Q14831 915 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 C2orf76Q3KRA6 126 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 NSUN5P2Q63ZY6 315 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 FAM111BQ6SJ93 734 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 FAM214BQ7L5A3 538 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 LYG2Q86SG7 212 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 MISPQ8IVT2 679 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 BAP18Q8IXM2 172 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 GALNT16Q8N428 558 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF561Q8N587 486 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 COMMD1Q8N668 190 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 COX18Q8N8Q8 333 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF610Q8N9Z0 462 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 RELL2Q8NC24 303 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-204ENST00000539847 OR5AP2Q8NGF4 316 aa6.84□□□□□ -1.31
CCDC60-204ENST00000539847 OR2G2Q8NGZ5 317 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms