RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GTF3C1Q12789 2109 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 HPNP05981 417 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 LIPCP11150 499 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 EIF2B2P49770 351 aaKnown RBP12.41□□□□□ -0.42
ACTN1-205ENST00000538545 ABLIM2Q6H8Q1 611 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 B4GALT7Q9UBV7 327 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 RELNP78509 3460 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 TMEM272A0A1B0GTI8 110 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 ORC5O43913 435 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 ACHEP22303 614 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 GDNFP39905 211 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 ART1P52961 327 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 SNAI3Q3KNW1 292 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 TMEM244Q5VVB8 128 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 PLET1Q6UQ28 207 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF704Q6ZNC4 412 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-205ENST00000538545 TOMM5Q8N4H5 51 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 LYZL4Q96KX0 146 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 LDAHQ9H6V9 325 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 LRP3O75074 770 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 MOGAT2Q3SYC2 334 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF544Q6NX49 715 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 CPNE4Q96A23 557 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-205ENST00000538545 CNTD2Q9H8S5 307 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 RNF121Q9H920 327 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 SLC7A10Q9NS82 523 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 NUFIP1Q9UHK0 495 aaKnown RBP12.4□□□□□ -0.42
ACTN1-205ENST00000538545 CAMK2AQ9UQM7 478 aa12.4□□□□□ -0.42
ACTN1-205ENST00000538545 NOSIPQ9Y314 301 aaKnown RBP12.4□□□□□ -0.42
ACTN1-205ENST00000538545 GMDSO60547 372 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 ISG15P05161 165 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 UBCP0CG48 685 aaKnown RBP12.39□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF708P17019 499 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF32P17041 273 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 TAS2R20P59543 309 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 RAB11BQ15907 218 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 SFRP4Q6FHJ7 346 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-205ENST00000538545 DRAXINQ8NBI3 349 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-205ENST00000538545 SLC25A28Q96A46 364 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 HAVCR1Q96D42 359 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 S100A16Q96FQ6 103 aaKnown RBP12.39□□□□□ -0.43
ACTN1-205ENST00000538545 DMRTB1Q96MA1 342 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 SF3B5Q9BWJ5 86 aaKnown RBP12.39□□□□□ -0.43
ACTN1-205ENST00000538545 PRRG4Q9BZD6 226 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 C12orf49Q9H741 205 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 SPRR3Q9UBC9 169 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 RCE1Q9Y256 329 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 CACNG2Q9Y698 323 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 NBEAQ8NFP9 2946 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 A0A1B0GVI7 797 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 EFSO43281 561 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 CYTIPO60759 359 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 KRT33AO76009 404 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 CCL2P13500 99 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 GIFP27352 417 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 HTR2CP28335 458 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 MMP15P51511 669 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 KCNMB1Q16558 191 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 TATDN3Q17R31 274 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 AGAP6Q5VW22 663 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 CMBLQ96DG6 245 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 FOXB1Q99853 325 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
ACTN1-205ENST00000538545 A0A1W2PP11 408 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 KLRC4-KLRK1H3BQV0 150 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 SLC17A2O00624 439 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 CTAG2O75638 210 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 GLSO94925 669 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 TGM6O95932 706 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 CD46P15529 392 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 DCTDP32321 178 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 NBL1P41271 181 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF84P51523 738 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 GJC3Q8NFK1 279 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 IP6K3Q96PC2 410 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 TMEM38BQ9NVV0 291 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 KLF13Q9Y2Y9 288 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 SMG1Q96Q15 3661 aaKnown RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ARHGAP21Q5T5U3 1957 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 IGF2RP11717 2491 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 CALCBP10092 127 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ARSBP15848 533 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 TNFSF10P50591 281 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 SOX8P57073 446 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 LSM6P62312 80 aaKnown RBP12.38□□□□□ -0.43
ACTN1-205ENST00000538545 SLC10A1Q14973 349 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 FAM166AQ6J272 317 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 CHAC2Q8WUX2 184 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 NUDT15Q9NV35 164 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 LUZP4Q9P127 313 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 ZNF503-AS2A6NEH8 195 aa12.38□□□□□ -0.43
ACTN1-205ENST00000538545 M0R135 149 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms