RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 THEM6Q8WUY1 208 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 SPRYD4Q8WW59 207 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-227ENST00000533909 STMN2Q93045 179 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 KCNJ15Q99712 375 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 CIB1Q99828 191 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 ZNF275Q9NSD4 429 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-227ENST00000533909 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.58
CAPN1-227ENST00000533909 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 TBX1O43435 398 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 TLX2O43763 284 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-227ENST00000533909 SELENOFO60613 162 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 ANXA2P07355 339 aaKnown RBP11.39□□□□□ -0.59
CAPN1-227ENST00000533909 LYNP07948 512 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 H2BFMP0C1H6 154 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 CRYBB2P43320 205 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 SLC3A1Q07837 685 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 RIN1Q13671 783 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 PCK2Q16822 640 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 SLX4IPQ5VYV7 408 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
CAPN1-227ENST00000533909 BHLHE23Q8NDY6 225 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 BBS1Q8NFJ9 593 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 OR10S1Q8NGN2 331 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 ST7LQ8TDW4 575 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 CCL17Q92583 94 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 PKP2Q99959 881 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 TOR3AQ9H497 397 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 NARFLQ9H6Q4 476 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-227ENST00000533909 LAMP5Q9UJQ1 280 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
CAPN1-227ENST00000533909 A0A096LNT2 108 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 LRP5LA4QPB2 252 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 GGT3PA6NGU5 568 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 ZAR1LA6NP61 321 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 PRKYO43930 277 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 ADH4P08319 380 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 PSKH1P11801 424 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 CX3CR1P49238 355 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 RAD23AP54725 363 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 GK2Q14410 553 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-227ENST00000533909 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-227ENST00000533909 KRTAP27-1Q3LI81 207 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 COLCA1Q6ZS62 124 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 NAA40Q86UY6 237 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 TIGD4Q8IY51 512 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 TCEANCQ8N8B7 351 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 OR8G5Q8NG78 346 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 OTOSQ8NHW6 89 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 RNF133Q8WVZ7 376 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 RAB1CQ92928 201 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 IL4I1Q96RQ9 567 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 MARCH7Q9H992 704 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 TREM2Q9NZC2 230 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 DNAJC27Q9NZQ0 273 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 ZFHX3Q15911 3703 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 CR1P17927 2039 aa11.38□□□□□ -0.59
CAPN1-227ENST00000533909 LOC100289279A0A1B0GTE1 492 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 A8MV72 311 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 CD55P08174 381 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 MRPL3P09001 348 aaKnown RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 IGHV4-31P0DP07 118 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 SLC2A1P11166 492 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 ZNF16P17020 682 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 SRP9P49458 86 aaKnown RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 CDC42P60953 191 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 MVKQ03426 396 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TRIP10Q15642 601 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TIGD6Q17RP2 521 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TMEM255AQ5JRV8 349 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 KCTD18Q6PI47 426 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 SLC16A9Q7RTY1 509 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 GID4Q8IVV7 300 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 OR10AD1Q8NGE0 317 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TMEM163Q8TC26 289 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 HPS1Q92902 700 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 CNN2Q99439 309 aaKnown RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TEAD3Q99594 435 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 YIPF3Q9GZM5 350 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 OPA3Q9H6K4 179 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 S100A14Q9HCY8 104 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TMEM100Q9NV29 134 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 IMPAD1Q9NX62 359 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 IL19Q9UHD0 177 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 NOP16Q9Y3C1 178 aaKnown RBP11.37□□□□□ -0.59
CAPN1-227ENST00000533909 TMEM14AQ9Y6G1 99 aa11.37□□□□□ -0.59
CAPN1-227ENST00000533909 FN1P02751 2386 aaKnown RBP11.36□□□□□ -0.59
CAPN1-227ENST00000533909 ISPDA4D126 451 aa11.36□□□□□ -0.59
CAPN1-227ENST00000533909 SLC22A31A6NKX4 558 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms