RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TMED7-TICAM2A0A0A6YYA0 188 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 F6UZH7 168 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 PRAMEF26H0Y7S4 382 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 H0YGG7 62 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 STMND1H3BQB6 276 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 HIST1H1CP16403 213 aaKnown RBP3.65□□□□□ -1.82
SOX6-217ENST00000533870 ITGA3P26006 1051 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 S100A7P31151 101 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 CRYBA2P53672 197 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 ARF3P61204 181 aaPredicted RBP3.65□□□□□ -1.82
SOX6-217ENST00000533870 MRPL49Q13405 166 aaKnown RBP3.65□□□□□ -1.82
SOX6-217ENST00000533870 PPP1R1AQ13522 171 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 AWAT1Q58HT5 328 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 LRRC73Q5JTD7 316 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 RD3Q7Z3Z2 195 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 MRGPRGQ86SM5 289 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 LRTM2Q8N967 370 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 ANAPC16Q96DE5 110 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 COX14Q96I36 57 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 LMF1Q96S06 567 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 ABHD6Q9BV23 337 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 TMEM106CQ9BVX2 250 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 EGLN1Q9GZT9 426 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 DNAJB12Q9NXW2 375 aaKnown RBP3.65□□□□□ -1.82
SOX6-217ENST00000533870 RCC2Q9P258 522 aaKnown RBP3.65□□□□□ -1.82
SOX6-217ENST00000533870 GJD2Q9UKL4 321 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 ABCA3Q99758 1704 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 PRAMEF25A6NGN4 478 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 FRG2CA6NGY1 282 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 ZNF814B7Z6K7 855 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 FAM227AF5H4B4 570 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 DVL1O14640 695 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 CBX7O95931 251 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 ST6GAL1P15907 406 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 CXCL2P19875 107 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 RTL8BQ17RB0 113 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 PRRT3Q5FWE3 981 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 IER5LQ5T953 404 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 OR2T2Q6IF00 324 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 LILRA6Q6PI73 481 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 REC114Q7Z4M0 266 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 MMP21Q8N119 569 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 OR52R1Q8NGF1 315 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 OR2G3Q8NGZ4 309 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 KLHDC7BQ96G42 594 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 PBX4Q9BYU1 374 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 MTCH2Q9Y6C9 303 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 WNT6Q9Y6F9 365 aa3.65□□□□□ -1.82
SOX6-217ENST00000533870 UBR2Q8IWV8 1755 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 C9orf170A2RU37 121 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 GLOD5A6NK44 160 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 SCGB2A1O75556 95 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 OR2C1O95371 312 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 CD99P14209 185 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 ZNF28P17035 718 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 GABREP78334 506 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 DCDP81605 110 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 C17orf67Q0P5P2 114 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 RUNX3Q13761 415 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 DNM1P46Q6ZS02 220 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 VN1R2Q8NFZ6 395 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 OR5T1Q8NG75 326 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 AKR7LQ8NHP1 331 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 FAM216AQ8WUB2 273 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 NANOS1Q8WY41 292 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 GTF3AQ92664 365 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 LHX4Q969G2 390 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 HIST1H2BAQ96A08 127 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 BOD1Q96IK1 185 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 SEMA6CQ9H3T2 930 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 TUBD1Q9UJT1 453 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 HDGFL3Q9Y3E1 203 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 PUS1Q9Y606 427 aaKnown RBP eCLIP3.65□□□□□ -1.83
SOX6-217ENST00000533870 ZNF831Q5JPB2 1677 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 K7ERU9 68 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 ST8SIA5O15466 376 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 MBTPS2O43462 519 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 ISG15P05161 165 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 GRPRP30550 384 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 ERVS71-1P61550 626 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 LSM6P62312 80 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 MRPS21P82921 87 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 ZNF506Q5JVG8 444 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 RPUSD3Q6P087 351 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 PLXDC1Q8IUK5 500 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 OR4B1Q8NGF8 309 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 OR51T1Q8NGJ9 327 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 FAM213BQ8TBF2 198 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 MCHR2Q969V1 340 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 SEC22AQ96IW7 307 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 OR51I2Q9H344 312 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 CRLF2Q9HC73 371 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 PLEKHJ1Q9NW61 149 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 NEUROG3Q9Y4Z2 214 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 MARF1Q9Y4F3 1742 aaKnown RBP3.65□□□□□ -1.83
SOX6-217ENST00000533870 C4orf47A7E2U8 309 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 PCCBP05166 539 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 SERPINA7P05543 415 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 FBXO45P0C2W1 286 aa3.65□□□□□ -1.83
SOX6-217ENST00000533870 BLVRBP30043 206 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms