RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 HFEQ30201 348 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 CYB5R2Q6BCY4 276 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 USP51Q70EK9 711 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 YIPF5Q969M3 257 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 ZMYND19Q96E35 227 aaPredicted RBP13.47□□□□□ -0.25
TSKU-204ENST00000533752 ZNF582Q96NG8 517 aaPredicted RBP13.47□□□□□ -0.25
TSKU-204ENST00000533752 OPA3Q9H6K4 179 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 MSL2Q9HCI7 577 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 ZNF275Q9NSD4 429 aaPredicted RBP13.47□□□□□ -0.25
TSKU-204ENST00000533752 CENPMQ9NSP4 180 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 FN1P02751 2386 aaKnown RBP13.47□□□□□ -0.25
TSKU-204ENST00000533752 ZAR1LA6NP61 321 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 IQCF6A8MYZ5 107 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 CLDN25C9JDP6 229 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 PPIHO43447 177 aaKnown RBP13.46□□□□□ -0.25
TSKU-204ENST00000533752 PSKH1P11801 424 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 SLC2A5P22732 501 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 COL8A2P25067 703 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 HSD11B1P28845 292 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 HLXQ14774 488 aaPredicted RBP13.46□□□□□ -0.25
TSKU-204ENST00000533752 C6orf52Q5T4I8 152 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 MRPL21Q7Z2W9 205 aaKnown RBP13.46□□□□□ -0.25
TSKU-204ENST00000533752 OTOSQ8NHW6 89 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 RNF133Q8WVZ7 376 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 TIMD4Q96H15 378 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 CIB1Q99828 191 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 ABHD6Q9BV23 337 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 GABARAPL3Q9BY60 117 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 ORC6Q9Y5N6 252 aa13.46□□□□□ -0.25
TSKU-204ENST00000533752 SONP18583 2426 aaKnown RBP13.46□□□□□ -0.25
TSKU-204ENST00000533752 SAC3D1A6NKF1 404 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 H3BNX3 289 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 CDC14BO60729 498 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 LILRA1O75019 489 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 MITFO75030 526 aaPredicted RBP13.45□□□□□ -0.26
TSKU-204ENST00000533752 LYNP07948 512 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 APOFQ13790 326 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 GK2Q14410 553 aaPredicted RBP13.45□□□□□ -0.26
TSKU-204ENST00000533752 C12orf73Q69YU5 71 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 PGAP1Q75T13 922 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 OR8G5Q8NG78 346 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 OR2Z1Q8NG97 314 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 OR13G1Q8NGZ3 307 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.45□□□□□ -0.26
TSKU-204ENST00000533752 IL19Q9UHD0 177 aa13.45□□□□□ -0.26
TSKU-204ENST00000533752 TMEFF2Q9UIK5 374 aaPredicted RBP13.45□□□□□ -0.26
TSKU-204ENST00000533752 NOP16Q9Y3C1 178 aaKnown RBP13.45□□□□□ -0.26
TSKU-204ENST00000533752 SLC22A31A6NKX4 558 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 A8MV72 311 aaPredicted RBP13.44□□□□□ -0.26
TSKU-204ENST00000533752 XRCC2O43543 280 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 PRKYO43930 277 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 SELENOFO60613 162 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 OPRL1P41146 370 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 CX3CR1P49238 355 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 PRKXP51817 358 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 SPATC1Q76KD6 591 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 SLC16A9Q7RTY1 509 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 GID4Q8IVV7 300 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 OR5AS1Q8N127 324 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 BBS1Q8NFJ9 593 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 TMEM163Q8TC26 289 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 PKP2Q99959 881 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 YIPF3Q9GZM5 350 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 SLC22A4Q9H015 551 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 YAE1D1Q9NRH1 226 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 H2AFY2Q9P0M6 372 aaPredicted RBP13.44□□□□□ -0.26
TSKU-204ENST00000533752 LAMP5Q9UJQ1 280 aa13.44□□□□□ -0.26
TSKU-204ENST00000533752 LRP5LA4QPB2 252 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 INAFM1C9JVW0 142 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 IFNL4K9M1U5 179 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 H2BFMP0C1H6 154 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 ZNF16P17020 682 aaPredicted RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 CFL1P23528 166 aaKnown RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 EPHA2P29317 976 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 NAA10P41227 235 aaPredicted RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 SRP9P49458 86 aaKnown RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 TRIP10Q15642 601 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 SNAI3Q3KNW1 292 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 NXNL2Q5VZ03 156 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 FAM166AQ6J272 317 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.43□□□□□ -0.263e-11■■■□□ 15.5
TSKU-204ENST00000533752 Q6ZR03 302 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 PEG10Q86TG7 708 aaKnown RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 OR52H1Q8NGJ2 320 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 SPRYD4Q8WW59 207 aaPredicted RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 CCL17Q92583 94 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 RAB1CQ92928 201 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 CNN2Q99439 309 aaKnown RBP13.43□□□□□ -0.26
TSKU-204ENST00000533752 TEAD3Q99594 435 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 SLC30A2Q9BRI3 323 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 RIBC2Q9H4K1 309 aa13.43□□□□□ -0.26
TSKU-204ENST00000533752 USE1Q9NZ43 259 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms