RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 Q96M85 177 aa13.32□□□□□ -0.28
COL16A1-216ENST00000529928 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
COL16A1-216ENST00000529928 HCAR1Q9BXC0 346 aa13.32□□□□□ -0.28
COL16A1-216ENST00000529928 MMADHCQ9H3L0 296 aaPredicted RBP13.32□□□□□ -0.28
COL16A1-216ENST00000529928 TMCC3Q9ULS5 477 aa13.32□□□□□ -0.28
COL16A1-216ENST00000529928 RER1O15258 196 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 HLA-DPB1P04440 258 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 NUDT2P50583 147 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 MAB21L1Q13394 359 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 OTPQ5XKR4 325 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 PIGWQ7Z7B1 504 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 VTCN1Q7Z7D3 282 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
COL16A1-216ENST00000529928 SCCPDHQ8NBX0 429 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 C19orf18Q8NEA5 215 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 NDEL1Q9GZM8 345 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 FAM107BQ9H098 131 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 HDHD2Q9H0R4 259 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 CTSZQ9UBR2 303 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 SNX13Q9Y5W8 968 aa13.31□□□□□ -0.28
COL16A1-216ENST00000529928 CMYA5Q8N3K9 4069 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 C5orf63A6NC05 138 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 CXCR6O00574 342 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 SLC16A7O60669 478 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 FAM20BO75063 409 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 KHDRBS3O75525 346 aaKnown RBP13.3□□□□□ -0.28
COL16A1-216ENST00000529928 ALX3O95076 343 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 PRDX6P30041 224 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 CD200P41217 278 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 CLEC12AQ5QGZ9 265 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 Q6ZSV7 163 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 FAM122BQ7Z309 247 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 TSEN54Q7Z6J9 526 aaKnown RBP13.3□□□□□ -0.28
COL16A1-216ENST00000529928 RNF113BQ8IZP6 322 aaKnown RBP13.3□□□□□ -0.28
COL16A1-216ENST00000529928 OFCC1Q8IZS5 231 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 GJC3Q8NFK1 279 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 LHX4Q969G2 390 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 TPD52L3Q96J77 140 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 COQ7Q99807 217 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 SIRPDQ9H106 197 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 SYT4Q9H2B2 425 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 RERGLQ9H628 205 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 C16orf95Q9H693 158 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 WDR76Q9H967 626 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 COA3Q9Y2R0 106 aaPredicted RBP13.3□□□□□ -0.28
COL16A1-216ENST00000529928 POLR1DQ9Y2S0 133 aa13.3□□□□□ -0.28
COL16A1-216ENST00000529928 A0A0U1RQK1 487 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 C3orf80F5H4A9 247 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 FFAR1O14842 300 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 CSF1P09603 554 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 RAD23AP54725 363 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 PSME3P61289 254 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
COL16A1-216ENST00000529928 TRAM2Q15035 370 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 KCNMB1Q16558 191 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 ZBED5Q49AG3 693 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 HIST2H3PS2Q5TEC6 136 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 COLCA1Q6ZS62 124 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 HIST2H3AQ71DI3 136 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 CBLL1Q75N03 491 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 ACOT11Q8WXI4 607 aaPredicted RBP13.29□□□□□ -0.28
COL16A1-216ENST00000529928 CMTM5Q96DZ9 223 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 FN3KRPQ9HA64 309 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 NMNAT1Q9HAN9 279 aaPredicted RBP13.29□□□□□ -0.28
COL16A1-216ENST00000529928 TRIM36Q9NQ86 728 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 UFSP2Q9NUQ7 469 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 RNF7Q9UBF6 113 aa13.29□□□□□ -0.28
COL16A1-216ENST00000529928 LGALS8O00214 317 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 CDC42EP2O14613 210 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 ADAM20O43506 726 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 NDUFA2O43678 99 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 SDHAP31040 664 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 GPR4P46093 362 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 GNGT1P63211 74 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 GK2Q14410 553 aaPredicted RBP13.28□□□□□ -0.28
COL16A1-216ENST00000529928 MPPED2Q15777 294 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 BEAN1Q3B7T3 259 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 C11orf91Q3C1V1 193 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 PRAMEF6Q5VXH4 476 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 GPR139Q6DWJ6 353 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 SFRP4Q6FHJ7 346 aaPredicted RBP13.28□□□□□ -0.28
COL16A1-216ENST00000529928 DHRS7BQ6IAN0 325 aaPredicted RBP13.28□□□□□ -0.28
COL16A1-216ENST00000529928 PGM2L1Q6PCE3 622 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 ZNF730Q6ZMV8 503 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 TMPRSS11FQ6ZWK6 438 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 LZICQ8WZA0 190 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 NSRP1Q9H0G5 558 aaKnown RBP13.28□□□□□ -0.28
COL16A1-216ENST00000529928 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 RHCGQ9UBD6 479 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 NOP16Q9Y3C1 178 aaKnown RBP13.28□□□□□ -0.28
COL16A1-216ENST00000529928 FAM96BQ9Y3D0 163 aa13.28□□□□□ -0.28
COL16A1-216ENST00000529928 A0A087WUU8 490 aa13.27□□□□□ -0.29
COL16A1-216ENST00000529928 TRAV38-1A0A0B4J264 116 aa13.27□□□□□ -0.29
COL16A1-216ENST00000529928 BTBD17A6NE02 478 aa13.27□□□□□ -0.29
COL16A1-216ENST00000529928 J3KTA2 159 aa13.27□□□□□ -0.29
COL16A1-216ENST00000529928 TSPAN9O75954 239 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms