RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 UBE2MP61081 183 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 STXBP1P61764 594 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 SMARCB1Q12824 385 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 SLAMF1Q13291 335 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 PMS2P3Q13401 168 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 EIF4EBP2Q13542 120 aaPredicted RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 MAPRE2Q15555 327 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 TSC22D1Q15714 1073 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 PIGGQ5H8A4 983 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF493Q6ZR52 646 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 TPGS1Q6ZTW0 290 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ABHD13Q7L211 337 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 CYP4Z1Q86W10 505 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 MKXQ8IYA7 352 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 RNF175Q8N4F7 328 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF565Q8N9K5 539 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 OR51G1Q8NGK1 321 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 OR6N2Q8NGY6 317 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 OR10J6PQ8NGY7 276 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 TMEM239Q8WW34 195 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 TMEM158Q8WZ71 300 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 GTF2H4Q92759 462 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 RNF170Q96K19 258 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 DNAJC1Q96KC8 554 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 WFIKKN1Q96NZ8 548 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 MED10Q9BTT4 135 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 UCK1Q9HA47 277 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ANKHQ9HCJ1 492 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 RETNQ9HD89 108 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 VCX3AQ9NNX9 186 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 OR2S2Q9NQN1 319 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 RBAKQ9NYW8 714 aaPredicted RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 MRM2Q9UI43 246 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ST3GAL6Q9Y274 331 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 HYOU1Q9Y4L1 999 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 PUS1Q9Y606 427 aaKnown RBP eCLIP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 MRPS18BQ9Y676 258 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 UBN2Q6ZU65 1347 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CDC42BPBQ9Y5S2 1711 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 C1orf232A0A0U1RR37 186 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 A0A1B0GW15 77 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 GOLGA8RI6L899 631 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 PRMT5O14744 637 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 PLEKHA8P1O95397 391 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 RAB3DO95716 219 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 GLAP06280 429 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 ACSM4P0C7M7 580 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CALM1P0DP23 149 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CALM2P0DP24 149 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CALM3P0DP25 149 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CXCL5P42830 114 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF136P52737 540 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CLDN6P56747 220 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 MRPS15P82914 257 aaKnown RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 GTF3C1Q12789 2109 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 DGCR6Q14129 220 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 PRPSAP1Q14558 356 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 OR7A5Q15622 319 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 TNXAQ16473 311 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 KCTD19Q17RG1 926 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 TRMT5Q32P41 509 aaKnown RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 TMEM150AQ86TG1 271 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 SNX31Q8N9S9 440 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CYB561A3Q8NBI2 242 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 NOXO1Q8NFA2 376 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 OR2A1Q8NGT9 310 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 OR4S2Q8NH73 311 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 ITFG1Q8TB96 612 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 TFGQ92734 400 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 FAM3DQ96BQ1 224 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 LRRC45Q96CN5 670 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF514Q96K75 400 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 SDHCQ99643 169 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 HDHD3Q9BSH5 251 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 ULBP2Q9BZM5 246 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CDC42EP4Q9H3Q1 356 aaKnown RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 SDHAF3Q9NRP4 125 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 NECAP2Q9NVZ3 263 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CLN6Q9NWW5 311 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 SLC17A7Q9P2U7 560 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF629Q9UEG4 869 aaPredicted RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 PSMD13Q9UNM6 376 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 CBY1Q9Y3M2 126 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 FADS3Q9Y5Q0 445 aa2.97□□□□□ -1.93
C11orf88-204ENST00000529661 LRPPRCP42704 1394 aaKnown RBP2.97□□□□□ -1.93
C11orf88-204ENST00000529661 IGLV11-55A0A075B6I3 123 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 A0A1B0GTI1 187 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 TSPAN11A1L157 253 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 TMEM213A2RRL7 107 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 F8VP50 259 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 SMKR1H3BMG3 65 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 MKRN2OSH3BPM6 223 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 TOR1AO14656 332 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 NUPL2O15504 423 aaKnown RBP2.96□□□□□ -1.94
C11orf88-204ENST00000529661 MYO1DO94832 1006 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 SLC25A27O95847 323 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 HBE1P02100 147 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 CD40LGP29965 261 aa2.96□□□□□ -1.94
C11orf88-204ENST00000529661 OR1E1P30953 314 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms