RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
SSBP3-211ENST00000528787 HELZ2Q9BYK8 2649 aaKnown RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 A0A1B0GVI7 797 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 LOC390937A0A1W2PQ73 354 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 A0A1W2PR80 420 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 A1L4Q6 167 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 MAGEA13PA6NCF6 341 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 B9A039 149 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PYCARD-AS1I3L0S3 204 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 HS3ST1O14792 307 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 TBX1O43435 398 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 XPNPEP2O43895 674 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 SMPD2O60906 423 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CLDN1O95832 211 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 GPANK1O95872 356 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ISG15P05161 165 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 SCG5P05408 212 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PATE4P0C8F1 98 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 TTKP33981 857 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 MAP2K3P46734 347 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 KLF3P57682 345 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PPP1CBP62140 327 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 TUBA1BP68363 451 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 TUBA4AP68366 448 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 SRSF1Q07955 248 aaKnown RBP eCLIP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CDSNQ15517 529 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 SMN1Q16637 294 aaKnown RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF672Q499Z4 452 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 LIPNQ5VXI9 398 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 MBNL2Q5VZF2 373 aaKnown RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF773Q6PK81 442 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PAMR1Q6UXH9 720 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 LRRN1Q6UXK5 716 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 FBXW12Q6X9E4 464 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 COLCA1Q6ZS62 124 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 TUBA1AQ71U36 451 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PGAP1Q75T13 922 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 DOK3Q7L591 496 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF367Q7RTV3 350 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 LHFPL3Q86UP9 236 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF611Q8N823 705 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 SPERTQ8NA61 448 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 OR5AK2Q8NH90 309 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 SPRYD4Q8WW59 207 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZNRF4Q8WWF5 429 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PHYHIPQ92561 330 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PIGTQ969N2 578 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 C4orf36Q96KX1 117 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 C1QTNF6Q9BXI9 259 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PLK3Q9H4B4 646 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CXorf56Q9H5V9 222 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF696Q9H7X3 374 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PLEKHA1Q9HB21 404 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 PNRC2Q9NPJ4 139 aaKnown RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CA10Q9NS85 328 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CISD1Q9NZ45 108 aaKnown RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 CKLFQ9UBR5 152 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ZDHHC8Q9ULC8 765 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 GTF2A1LQ9UNN4 478 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 FLNCQ14315 2725 aa6.86□□□□□ -1.31
SSBP3-211ENST00000528787 USP9XQ93008 2570 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-211ENST00000528787 ICE1Q9Y2F5 2266 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 LOC100509620A0A075B734 347 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 TRBV2A0A0J9YWF9 115 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 FAM221AA4D161 298 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 GGT3PA6NGU5 568 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ANXA2P2A6NMY6 339 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ANKRD30BLA7E2S9 258 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 DEFB108AA8MXU0 73 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 IFNL4K9M1U5 179 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 CTAG2O75638 210 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 GATBO75879 557 aaKnown RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF250P15622 560 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 GRNP28799 593 aaKnown RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 SERPINF1P36955 418 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 GNALP38405 381 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 FABP6P51161 128 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 PRKXP51817 358 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 CDH15P55291 814 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF121P58317 390 aaPredicted RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF85Q03923 595 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 MLLT11Q13015 90 aaPredicted RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ALKBH1Q13686 389 aaKnown RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 MED22Q15528 200 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 EFNB3Q15768 340 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 PCGF3Q3KNV8 242 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 TIMM50Q3ZCQ8 353 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 YIF1BQ5BJH7 314 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 LYPD4Q6UWN0 246 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 B3GLCTQ6Y288 498 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF584Q8IVC4 421 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ELMOD2Q8IZ81 293 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF676Q8N7Q3 588 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 NANOGP1Q8N7R0 232 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 TSPAN14Q8NG11 270 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 PP6455Q8WZ26 134 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 RORBQ92753 470 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms