RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 FAM117AQ9C073 453 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 A0A087WV48 116 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 TRBV11-1A0A0K0K1C0 115 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 A0A1W2PNR3 127 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 A0A1W2PPE3 182 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 MUC1P15941 1255 aaPredicted RBP16.13■□□□□ 0.17
LTBP3-210ENST00000528516 RPL18Q07020 188 aaKnown RBP16.13■□□□□ 0.17
LTBP3-210ENST00000528516 C1QL3Q5VWW1 255 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 FAM219AQ8IW50 185 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 OR51T1Q8NGJ9 327 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 NRIP2Q9BQI9 281 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 WDR76Q9H967 626 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 MMP26Q9NRE1 261 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 C14orf166Q9Y224 244 aaKnown RBP16.13■□□□□ 0.17
LTBP3-210ENST00000528516 VWA8A3KMH1 1905 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 EFCAB7A8K855 629 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 RNASEK-C17orf49H0YIS7 233 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 HSPB6O14558 160 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 LCATP04180 440 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 RPS11P62280 158 aaKnown RBP eCLIP16.13■□□□□ 0.17
LTBP3-210ENST00000528516 ECH1Q13011 328 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 BCORP1Q8N888 145 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 ADAMTS18Q8TE60 1221 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 FAM3DQ96BQ1 224 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 FN3KRPQ9HA64 309 aa16.13■□□□□ 0.17
LTBP3-210ENST00000528516 SULT2B1O00204 365 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 CLN5O75503 358 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 IL33O95760 270 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 BIDP55957 195 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 SKP2Q13309 424 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 FAM57BQ71RH2 274 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 DCXRQ7Z4W1 244 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 GFI1Q99684 422 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 PIGQQ9BRB3 760 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 A0A1W2PPH5 198 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 TSPAN11A1L157 253 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 EIF4E2O60573 245 aaKnown RBP16.12■□□□□ 0.17
LTBP3-210ENST00000528516 PRF1P14222 555 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 ZNF440Q8IYI8 595 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 RGP1Q92546 391 aaPredicted RBP16.12■□□□□ 0.17
LTBP3-210ENST00000528516 VOPP1Q96AW1 172 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 TOLLIPQ9H0E2 274 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 STEAP1Q9UHE8 339 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 RARRES3Q9UL19 164 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 DOPEY2Q9Y3R5 2298 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 PDZD11Q5EBL8 140 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 EXOSC6Q5RKV6 272 aaKnown RBP16.12■□□□□ 0.17
LTBP3-210ENST00000528516 LY6G6FQ5SQ64 297 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 UEVLDQ8IX04 471 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 FAM24BQ8N5W8 94 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 SLC2A12Q8TD20 617 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 MEGF10Q96KG7 1140 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 LMF2Q9BU23 707 aaKnown RBP16.12■□□□□ 0.17
LTBP3-210ENST00000528516 EIF5A2Q9GZV4 153 aaKnown RBP16.12■□□□□ 0.17
LTBP3-210ENST00000528516 LAT2Q9GZY6 243 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 ZNF442Q9H7R0 627 aa16.12■□□□□ 0.17
LTBP3-210ENST00000528516 HELZP42694 1942 aaKnown RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 TMED7-TICAM2A0A0A6YYA0 188 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 RPS10P46783 165 aaKnown RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 CSRP2Q16527 193 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 ACKR1Q16570 336 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 MEX3BQ6ZN04 569 aaKnown RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 ST7LQ8TDW4 575 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 PHYHIPQ92561 330 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 HIST1H2AAQ96QV6 131 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 SLC25A21Q9BQT8 299 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 KLHL13Q9P2N7 655 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 SUSD2Q9UGT4 822 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 TMED7Q9Y3B3 224 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 RNF222A6NCQ9 220 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 SRPX2O60687 465 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 RAB5CP51148 216 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 NANOS3P60323 173 aaKnown RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 GALNT16Q8N428 558 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 OR5AP2Q8NGF4 316 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 RAB3CQ96E17 227 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 CARHSP1Q9Y2V2 147 aaKnown RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 SHANK1Q9Y566 2161 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 KLF4O43474 513 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 PRTGQ2VWP7 1150 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 BAHD1Q8TBE0 780 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-210ENST00000528516 NUDCD2Q8WVJ2 157 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 GFOD1Q9NXC2 390 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 ATRXP46100 2492 aa16.11■□□□□ 0.17
LTBP3-210ENST00000528516 A0A1W2PPV9 198 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 C5orf52A6NGY3 159 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 H7C1Q1 480 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 ZNF44P15621 663 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 GLP1RP43220 463 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 NDUFA6P56556 154 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 CA13Q8N1Q1 262 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 OR4S1Q8NGB4 309 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 EDEM2Q9BV94 578 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 TMPRSS5Q9H3S3 457 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 SEMA6CQ9H3T2 930 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 LHX9Q9NQ69 397 aa16.1■□□□□ 0.17
LTBP3-210ENST00000528516 EIF5AL1Q6IS14 154 aaKnown RBP16.1■□□□□ 0.17
LTBP3-210ENST00000528516 DPY19L2P2Q6ZN68 376 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms