RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SPTSSAQ969W0 71 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 FAHD2AQ96GK7 314 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
CAPN1-213ENST00000527897 C1QTNF5Q9BXJ0 243 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 YY1AP1Q9H869 796 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 TMEM106BQ9NUM4 274 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 IL19Q9UHD0 177 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 POMPQ9Y244 141 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 COL6A5A8TX70 2615 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-213ENST00000527897 FKBP6O75344 327 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 IGHV2-5P01817 119 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 PRKACGP22612 351 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 PRKXP51817 358 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 SLC25A1P53007 311 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 GK3PQ14409 553 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 GK2Q14410 553 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-213ENST00000527897 SHQ1Q6PI26 577 aaKnown RBP13.13□□□□□ -0.31
CAPN1-213ENST00000527897 PGAP1Q75T13 922 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
CAPN1-213ENST00000527897 OR13G1Q8NGZ3 307 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 SLCO4A1Q96BD0 722 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 SLAMF6Q96DU3 332 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 OR51V1Q9H2C8 321 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 CMC2Q9NRP2 79 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 PCDHB10Q9UN67 800 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 NPTNQ9Y639 398 aa13.13□□□□□ -0.31
CAPN1-213ENST00000527897 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 PLPP2O43688 288 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 HLA-DPB1P04440 258 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 SELEP16581 610 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 PAICSP22234 425 aaKnown RBP13.12□□□□□ -0.31
CAPN1-213ENST00000527897 GRK5P34947 590 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 GINS1Q14691 196 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 KRTAP27-1Q3LI81 207 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 SLC27A4Q6P1M0 643 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 CD300LDQ6UXZ3 194 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 COLCA1Q6ZS62 124 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF283Q8N7M2 679 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 OR6N2Q8NGY6 317 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF420Q8TAQ5 688 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-213ENST00000527897 ST7LQ8TDW4 575 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 SPRYD4Q8WW59 207 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-213ENST00000527897 TMEM158Q8WZ71 300 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 MEGF10Q96KG7 1140 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 NMNAT2Q9BZQ4 307 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 TMEM100Q9NV29 134 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 KIF17Q9P2E2 1029 aa13.12□□□□□ -0.31
CAPN1-213ENST00000527897 ARHGAP32A7KAX9 2087 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 TCRBV3S1A0A5B6 114 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 ARRDC5A6NEK1 342 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 IQCF6A8MYZ5 107 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 F5H5P2 479 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 GSC2O15499 205 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-213ENST00000527897 TIPRLO75663 272 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF205O95201 554 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 SLC2A1P11166 492 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 HOXB6P17509 224 aaKnown RBP13.11□□□□□ -0.31
CAPN1-213ENST00000527897 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
CAPN1-213ENST00000527897 LCN2P80188 198 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 EIF2B1Q14232 305 aaKnown RBP13.11□□□□□ -0.31
CAPN1-213ENST00000527897 SNAI3Q3KNW1 292 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 OR2AE1Q8NHA4 323 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 INTS14Q96SY0 518 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 SLC30A2Q9BRI3 323 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 CADM1Q9BY67 442 aaKnown RBP13.11□□□□□ -0.31
CAPN1-213ENST00000527897 METTL17Q9H7H0 456 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-213ENST00000527897 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
CAPN1-213ENST00000527897 WNK2Q9Y3S1 2297 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 GGT3PA6NGU5 568 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF878C9JN71 531 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 PRR23D1E9PI22 279 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-213ENST00000527897 MLNRO43193 412 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 TBX1O43435 398 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 PNPP00491 289 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 PRR23D2P0DMB1 279 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-213ENST00000527897 OSMP13725 252 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 ANXA8P13928 327 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 GSTT1P30711 240 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 MMP16P51512 607 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 BLVRAP53004 296 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 RAD23AP54725 363 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 BTG1P62324 171 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 BNIP1Q12981 228 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 KLHL12Q53G59 568 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 PLBD1Q6P4A8 553 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 MOGAT3Q86VF5 341 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 KLHL36Q8N4N3 616 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 ZMYND19Q96E35 227 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-213ENST00000527897 PLEKHA8Q96JA3 519 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 OCEL1Q9H607 264 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 GCM1Q9NP62 436 aa13.1□□□□□ -0.31
CAPN1-213ENST00000527897 DDX28Q9NUL7 540 aaKnown RBP13.1□□□□□ -0.31
CAPN1-213ENST00000527897 A0A0G2JMP0 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms