RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 THEM6Q8WUY1 208 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 SPRYD4Q8WW59 207 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-209ENST00000527469 STMN2Q93045 179 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 KCNJ15Q99712 375 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 CIB1Q99828 191 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 ZNF275Q9NSD4 429 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-209ENST00000527469 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.58
CAPN1-209ENST00000527469 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 TBX1O43435 398 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 TLX2O43763 284 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-209ENST00000527469 SELENOFO60613 162 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 ANXA2P07355 339 aaKnown RBP11.39□□□□□ -0.59
CAPN1-209ENST00000527469 LYNP07948 512 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 H2BFMP0C1H6 154 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 CRYBB2P43320 205 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 SLC3A1Q07837 685 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 RIN1Q13671 783 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 PCK2Q16822 640 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 SLX4IPQ5VYV7 408 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
CAPN1-209ENST00000527469 BHLHE23Q8NDY6 225 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 BBS1Q8NFJ9 593 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 OR10S1Q8NGN2 331 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 ST7LQ8TDW4 575 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 CCL17Q92583 94 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 PKP2Q99959 881 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 TOR3AQ9H497 397 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 NARFLQ9H6Q4 476 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-209ENST00000527469 LAMP5Q9UJQ1 280 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
CAPN1-209ENST00000527469 A0A096LNT2 108 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 LRP5LA4QPB2 252 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 GGT3PA6NGU5 568 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 ZAR1LA6NP61 321 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 PRKYO43930 277 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 ADH4P08319 380 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 PSKH1P11801 424 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 CX3CR1P49238 355 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 RAD23AP54725 363 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 GK2Q14410 553 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-209ENST00000527469 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-209ENST00000527469 KRTAP27-1Q3LI81 207 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 COLCA1Q6ZS62 124 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 NAA40Q86UY6 237 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 TIGD4Q8IY51 512 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 TCEANCQ8N8B7 351 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 OR8G5Q8NG78 346 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 OTOSQ8NHW6 89 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 RNF133Q8WVZ7 376 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 RAB1CQ92928 201 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 IL4I1Q96RQ9 567 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 MARCH7Q9H992 704 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 TREM2Q9NZC2 230 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 DNAJC27Q9NZQ0 273 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 ZFHX3Q15911 3703 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 CR1P17927 2039 aa11.38□□□□□ -0.59
CAPN1-209ENST00000527469 LOC100289279A0A1B0GTE1 492 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 A8MV72 311 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 CD55P08174 381 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 MRPL3P09001 348 aaKnown RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 IGHV4-31P0DP07 118 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 SLC2A1P11166 492 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 ZNF16P17020 682 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 SRP9P49458 86 aaKnown RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 CDC42P60953 191 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 MVKQ03426 396 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TRIP10Q15642 601 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TIGD6Q17RP2 521 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TMEM255AQ5JRV8 349 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 KCTD18Q6PI47 426 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 SLC16A9Q7RTY1 509 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 GID4Q8IVV7 300 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 OR10AD1Q8NGE0 317 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TMEM163Q8TC26 289 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 HPS1Q92902 700 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 CNN2Q99439 309 aaKnown RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TEAD3Q99594 435 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 YIPF3Q9GZM5 350 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 OPA3Q9H6K4 179 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 S100A14Q9HCY8 104 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TMEM100Q9NV29 134 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 IMPAD1Q9NX62 359 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 IL19Q9UHD0 177 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 NOP16Q9Y3C1 178 aaKnown RBP11.37□□□□□ -0.59
CAPN1-209ENST00000527469 TMEM14AQ9Y6G1 99 aa11.37□□□□□ -0.59
CAPN1-209ENST00000527469 FN1P02751 2386 aaKnown RBP11.36□□□□□ -0.59
CAPN1-209ENST00000527469 ISPDA4D126 451 aa11.36□□□□□ -0.59
CAPN1-209ENST00000527469 SLC22A31A6NKX4 558 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms