RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 A8MZ25 164 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 LRRN3E7EW58 273 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 BLOC1S5-TXNDC5H3BN57 136 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 PDLIM1O00151 329 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 TNFSF11O14788 317 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 CXCL13O43927 109 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 EIF1BO60739 113 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 NPIPB7O75200 414 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 SEC14L2O76054 403 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR7A10O76100 309 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 RCBTB2O95199 551 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR6A2O95222 327 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 SYNGR4O95473 234 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 MT-ATP6P00846 226 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 IGF2P01344 180 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 BGLAPP02818 100 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 HOXD4P09016 255 aaPredicted RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 SAGP10523 405 aaPredicted RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 ABOP16442 354 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZNF708P17019 499 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 PTNP21246 168 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 CBLP22681 906 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 AHCYP23526 432 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 GTF2E2P29084 291 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 SHC1P29353 583 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 GRPRP30550 384 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 GPR4P46093 362 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OMPP47874 163 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 SLC9A3P48764 834 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 LHX2P50458 406 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 DAPP51397 102 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 CAPZA1P52907 286 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 GBX2P52951 348 aaPredicted RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 MFAP4P55083 255 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 MLLT10P55197 1068 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 CLDN15P56746 228 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 CLDN18P56856 261 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 NUP107P57740 925 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 BRWD1-AS2P59051 145 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 RBPJQ06330 500 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 GTF3C1Q12789 2109 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 TSPAN31Q12999 210 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 PMS2P3Q13401 168 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZNF273Q14593 569 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR7A5Q15622 319 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 TRIP10Q15642 601 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZNF74Q16587 644 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 LRRC36Q1X8D7 754 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZNF718Q3SXZ3 478 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZBED5Q49AG3 693 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 LPCAT4Q643R3 524 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 HBMQ6B0K9 141 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 HIST2H2BCQ6DN03 193 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 HIST2H2BDQ6DRA6 164 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 SIGIRRQ6IA17 410 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZNF770Q6IQ21 691 aaPredicted RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 GFRALQ6UXV0 394 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 RBPMS2Q6ZRY4 209 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 TUBA1AQ71U36 451 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OAFQ86UD1 273 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 MEX3DQ86XN8 651 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 CHERPQ8IWX8 916 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 CDH26Q8IXH8 852 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 HS3ST5Q8IZT8 346 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 LRRC17Q8N6Y2 441 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 AQP11Q8NBQ7 271 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 POC1AQ8NBT0 407 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR10G2Q8NGC3 310 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR9Q2Q8NGE9 314 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR5M9Q8NGP3 310 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR51A7Q8NH64 312 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 OR10D3Q8NH80 312 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 PFN4Q8NHR9 129 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZPLD1Q8TCW7 415 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 LIPHQ8WWY8 451 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 DNAJC9Q8WXX5 260 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZHX1-C8orf76Q96EF9 292 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 DNAJA3Q96EY1 480 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 TNFRSF13CQ96RJ3 184 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 SLC29A1Q99808 456 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 CIB1Q99828 191 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 RBM4BQ9BQ04 359 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 TUBA1CQ9BQE3 449 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 PSD2Q9BQI7 771 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 RBM4Q9BWF3 364 aaKnown RBP3.9□□□□□ -1.79
USP48-211ENST00000526044 DGCR6LQ9BY27 220 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 VCX3BQ9H321 246 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 FKRPQ9H9S5 495 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 UBTD1Q9HAC8 227 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 PALMDQ9NP74 551 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 C8orf4Q9NR00 106 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 C1RLQ9NZP8 487 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 SPRR3Q9UBC9 169 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 FBXL17Q9UF56 701 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 KCNG2Q9UJ96 466 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZNF229Q9UJW7 825 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ORC6Q9Y5N6 252 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 APC2O95996 2303 aa3.9□□□□□ -1.79
USP48-211ENST00000526044 ZFHX4Q86UP3 3567 aa3.89□□□□□ -1.79
USP48-211ENST00000526044 FRYQ5TBA9 3013 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms