RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ADAD1Q96M93 576 aaKnown RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BNQ99877 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BMQ99879 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 FRRS1LQ9P0K9 344 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 FBXO7Q9Y3I1 522 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 KCNE3Q9Y6H6 103 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 PROB1E7EW31 1015 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 NME2P1O60361 137 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 OR8U9P0C7N5 309 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 CHATP28329 748 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 GNG10P50151 68 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SNRPD1P62314 119 aaKnown RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SP3Q02447 781 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ELOCQ15369 112 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 TOMM34Q15785 309 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 PCK2Q16822 640 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 KHDC3LQ587J8 217 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 LSRQ86X29 649 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 MAML2Q8IZL2 1156 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 KDM8Q8N371 416 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 OR8U1Q8NH10 309 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SSC4DQ8WTU2 575 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ZNRF4Q8WWF5 429 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 COL26A1Q96A83 441 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 PACRGQ96M98 296 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 JSRP1Q96MG2 331 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 DEFB118Q96PH6 123 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF385AQ96PM9 386 aaKnown RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 CST11Q9H112 138 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 NELFAQ9H3P2 528 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 MTHFD2LQ9H903 347 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 C20orf141Q9NUB4 165 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 MSRAQ9UJ68 235 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 WDR45Q9Y484 360 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 COCHO43405 550 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 EOMESO95936 686 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 METTL15P1P0C7V9 234 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 PET100P0DJ07 73 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 GIMD1P0DJR0 217 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 F3P13726 295 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 NPY4RP50391 375 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 TCEA2Q15560 299 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 THEM4Q5T1C6 240 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 RPL7L1Q6DKI1 246 aaKnown RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 GDF6Q6KF10 455 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 JAGN1Q8N5M9 183 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SUMF2Q8NBJ7 301 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 AGBL5Q8NDL9 886 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 OR10J5Q8NHC4 309 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 GRHL3Q8TE85 626 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 MR1Q95460 341 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SMIM3Q9BZL3 60 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SLC26A1Q9H2B4 701 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ALOX12BO75342 701 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ISG15P05161 165 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ERCC1P07992 297 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 CXCR1P25024 350 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 EFNB2P52799 333 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 TAS2R31P59538 309 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ZNHIT3Q15649 155 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SLC16A9Q7RTY1 509 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 CARFQ8N187 725 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 NOXO1Q8NFA2 376 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 NUP43Q8NFH3 380 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SEMA6DQ8NFY4 1073 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SNIP1Q8TAD8 396 aaKnown RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 FIBINQ8TAL6 211 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 WFDC5Q8TCV5 224 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 WBP2Q969T9 261 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM106AQ96A25 262 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ADGRG7Q96K78 797 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 NCOR1P1Q9H4R4 102 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 B4GALT6Q9UBX8 382 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 MRM2Q9UI43 246 aaKnown RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 RP1L1Q8IWN7 2480 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 TRBV24-1A0A075B6N3 115 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 FAM171A2A8MVW0 826 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SPINT1O43278 529 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SOD3P08294 240 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 OR5AC1P0C628 307 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 TAGLN2P37802 199 aaKnown RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 GATMP50440 423 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 CLDN2P57739 230 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SUPT4H1P63272 117 aaKnown RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ROM1Q03395 351 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 UBE2V2Q15819 145 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 MIDNQ504T8 468 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 C4orf17Q53FE4 359 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SLC48A1Q6P1K1 146 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF793Q6ZN11 406 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 OR9K2Q8NGE7 335 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 OR13C9Q8NGT0 318 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 OR2L2Q8NH16 312 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 FAM3DQ96BQ1 224 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 WDR92Q96MX6 357 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 PTCHD1Q96NR3 888 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 PRAP1Q96NZ9 151 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 IL17FQ96PD4 163 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 TNFRSF13CQ96RJ3 184 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms