RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 IQCF6A8MYZ5 107 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 IMPA2O14732 288 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 CD33P20138 364 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 SAA4P35542 130 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 RPL4P36578 427 aaKnown RBP9.54□□□□□ -0.88
SDCBP-211ENST00000523441 EFNB2P52799 333 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 RAD23AP54725 363 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 GMFBP60983 142 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 RAP1BP61224 184 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 RAP1AP62834 184 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 CD69Q07108 199 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 AQP6Q13520 282 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 HABP2Q14520 560 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-211ENST00000523441 KCNJ8Q15842 424 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 MEP1BQ16820 701 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 CDONQ4KMG0 1287 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 CORO6Q6QEF8 472 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 BLOC1S3Q6QNY0 202 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 OR13C2Q8NGS9 318 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 SPRYD4Q8WW59 207 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-211ENST00000523441 H1FXQ92522 213 aaKnown RBP9.54□□□□□ -0.88
SDCBP-211ENST00000523441 APOBEC3DQ96AK3 386 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-211ENST00000523441 SLCO4A1Q96BD0 722 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 OR5M11Q96RB7 305 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 CCL13Q99616 98 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 RPS6KA6Q9UK32 745 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 COA3Q9Y2R0 106 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-211ENST00000523441 ADAM18Q9Y3Q7 739 aa9.54□□□□□ -0.88
SDCBP-211ENST00000523441 TRBV5-3A0A0A0MS03 114 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 TRAV38-1A0A0B4J264 116 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 A0A1B0GVI7 797 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 OR6C6A6NF89 314 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 OOEPA6NGQ2 149 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 F5H5K5 113 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 RNASEK-C17orf49H0YIS7 233 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 XKRYO14609 159 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 POLR3GO15318 223 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 SNNO75324 88 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 FBXO24O75426 580 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 CTLA4P16410 223 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 MSX2P35548 267 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 RBM34P42696 430 aaKnown RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 SLC9A3P48764 834 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 RGS6P49758 472 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 ECH1Q13011 328 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 IKZF1Q13422 519 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 PATL1Q86TB9 770 aaKnown RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 NAA40Q86UY6 237 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 CALHM3Q86XJ0 350 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 PCYOX1LQ8NBM8 494 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 FNDC8Q8TC99 324 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 C17orf50Q8WW18 174 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 BPIFA2Q96DR5 249 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 Q96M85 177 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 WWC2-AS2Q96NR7 200 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 SSX3Q99909 188 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 ADAT1Q9BUB4 502 aaKnown RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 RHCGQ9UBD6 479 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 GRHPRQ9UBQ7 328 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 RPUSD1Q9UJJ7 312 aaKnown RBP9.53□□□□□ -0.88
SDCBP-211ENST00000523441 HIF3AQ9Y2N7 669 aa9.53□□□□□ -0.88
SDCBP-211ENST00000523441 SLC16A7O60669 478 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 LCATP04180 440 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 CD200P41217 278 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 GATA4P43694 442 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 YAP1P46937 504 aaKnown RBP9.52□□□□□ -0.89
SDCBP-211ENST00000523441 GK2Q14410 553 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-211ENST00000523441 MESTQ5EB52 335 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-211ENST00000523441 PGBD2Q6P3X8 592 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 DHDDSQ86SQ9 333 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 OAFQ86UD1 273 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 CMTM4Q8IZR5 234 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 SPERTQ8NA61 448 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 OR10A6Q8NH74 314 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 OR5R1Q8NH85 324 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 Q8TCH9 128 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 CFHR4Q92496 578 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 ZNF583Q96ND8 569 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 ZNF570Q96NI8 536 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 CITED2Q99967 270 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-211ENST00000523441 SSU72Q9NP77 194 aaKnown RBP9.52□□□□□ -0.89
SDCBP-211ENST00000523441 N6AMT1Q9Y5N5 214 aa9.52□□□□□ -0.89
SDCBP-211ENST00000523441 WI2-2373I1.2A0A1W2PRP0 233 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 NPIPB13A6NJU9 1138 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 EFCAB9A8MZ26 197 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 NPIPB4C9JG80 1138 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 PEX14O75381 377 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 OR5F1O95221 314 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 TFF1P04155 84 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 TSPAN19P0C672 248 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 GPR4P46093 362 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 SLC18A1P54219 525 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 PLA1AQ53H76 456 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 DLEU7Q6UYE1 221 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 PGAP1Q75T13 922 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 MRPL21Q7Z2W9 205 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms