RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NRBF2Q96F24 287 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 CERS2Q96G23 380 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 RNF145Q96MT1 663 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 MICU1Q9BPX6 476 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 AGMATQ9BSE5 352 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 SLC25A39Q9BZJ4 359 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 TPK1Q9H3S4 243 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 BEX1Q9HBH7 125 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 NOX3Q9HBY0 568 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 LHX9Q9NQ69 397 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 ABCC1P33527 1531 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 CASKIN1Q8WXD9 1431 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 ASTN1O14525 1302 aa2.92□□□□□ -1.94
HMGB1P1-201ENST00000522557 PZPP20742 1482 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 SCAF11Q99590 1463 aaKnown RBP2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 DOCK9Q9BZ29 2069 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 SIGLEC1Q9BZZ2 1709 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 TMEM2Q9UHN6 1383 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 DNMT1P26358 1616 aaKnown RBP2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 KIF14Q15058 1648 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 IGHV5-51A0A0C4DH38 117 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 A0A0J9YYE9 177 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 INS-IGF2F8WCM5 200 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 LSM8O95777 96 aaKnown RBP2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 HPRT1P00492 218 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 TRBC1P01850 177 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 PGA5P0DJD9 388 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 CALM1P0DP23 149 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 CALM2P0DP24 149 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 CALM3P0DP25 149 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 GABRG2P18507 467 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 GGT1P19440 569 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 BMI1P35226 326 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 RFC3P40938 356 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 FAM83EQ2M2I3 478 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 PTPN20Q4JDL3 420 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 GCSAMLQ5JQS6 135 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 TPTE2P1Q5T6R2 138 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 HES5Q5TA89 166 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 Q6P435 159 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 ARL9Q6T311 187 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 OAFQ86UD1 273 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 DUSP18Q8NEJ0 188 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 ECHDC3Q96DC8 303 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 OR2A5Q96R48 311 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 FOXC2Q99958 501 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 HDHD3Q9BSH5 251 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 COMMD3-BMI1R4GMX3 469 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 KDM5DQ9BY66 1539 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 SAMD9LQ8IVG5 1584 aa2.91□□□□□ -1.94
HMGB1P1-201ENST00000522557 ARHGAP35Q9NRY4 1499 aa2.9□□□□□ -1.94
HMGB1P1-201ENST00000522557 DOCK8Q8NF50 2099 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 IGHV3OR16-9A0A0B4J2B5 98 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 TMEM120BA0PK00 339 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 H7C417 338 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 GABRPO00591 440 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 NME4O00746 187 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 SOCS1O15524 211 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 KLK1P06870 262 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 IGHV1-8P0DP01 117 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF823P16415 610 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 MECOMQ03112 1051 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 KIR2DS1Q14954 304 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 THEM4Q5T1C6 240 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 AVPI1Q5T686 147 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 Q6ZR03 302 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 NTM-AS1Q6ZSK4 140 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 FAM86B1Q8N7N1 296 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 INO80EQ8NBZ0 244 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 CCDC54Q8NEL0 328 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 APH1BQ8WW43 257 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 RAB1CQ92928 201 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF317Q96PQ6 595 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC25A2Q9BXI2 301 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 PIGUQ9H490 435 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF442Q9H7R0 627 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 PATZ1Q9HBE1 687 aaKnown RBP2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 SAMSN1Q9NSI8 373 aaKnown RBP2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 MTFP1Q9UDX5 166 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF257Q9Y2Q1 563 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 FGD6Q6ZV73 1430 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 ADAMTS13Q76LX8 1427 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 VWDEQ8N2E2 1590 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 SUPT6HQ7KZ85 1726 aaKnown RBP2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 MYO5CQ9NQX4 1742 aa2.9□□□□□ -1.95
HMGB1P1-201ENST00000522557 ATP7AQ04656 1500 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ARID1AO14497 2285 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 IGKV1-8A0A0C4DH67 115 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 A0A1W2PPV4 95 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 PDZK1P1A8MUH7 402 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 SERPINE3A8MV23 424 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 H7C1H1 209 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 DNASE2O00115 360 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CA11O75493 328 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 GCM2O75603 506 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 TDP2O95551 362 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CD3GP09693 182 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 PFN2P35080 140 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CEACAM3P40198 252 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms