RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 S100A8P05109 93 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 RPL27P61353 136 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 FMODQ06828 376 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 NFATC4Q14934 902 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 IL34Q6ZMJ4 242 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 BHLHE23Q8NDY6 225 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 S100A13Q99584 98 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 GHRLQ9UBU3 117 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 PCDHGA1Q9Y5H4 931 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 TDRD6O60522 2096 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A1B0GTQ1 180 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 MEX3AA1L020 520 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 MBTPS2O43462 519 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF735P0CB33 412 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 POLR2GP62487 172 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 EMC4Q5J8M3 183 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 NUP54Q7Z3B4 507 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZDHHC22Q8N966 263 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF296Q8WUU4 475 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 KIRREL1Q96J84 757 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 LAT2Q9GZY6 243 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 SPACA1Q9HBV2 294 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 GDE1Q9NZC3 331 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 CEP290O15078 2479 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 FKTNO75072 461 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 PPICP45877 212 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 CLEC9AQ6UXN8 241 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF813Q6ZN06 617 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR52N5Q8NH56 324 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 RAB3CQ96E17 227 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 PFDN5Q99471 154 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF251Q9BRH9 671 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 PTGES2Q9H7Z7 377 aa11.49□□□□□ -0.57
TRAPPC9-208ENST00000520857 K7EPK0 472 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 ARG1P05089 322 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 GLI4P10075 376 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 HSD11B1P28845 292 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 CAMLGP49069 296 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 CX3CR1P49238 355 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 EGR4Q05215 589 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 FAM71E2Q8N5Q1 922 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 FAM24BQ8N5W8 94 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 TERB2Q8NHR7 220 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 GPX7Q96SL4 187 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 EHFQ9NZC4 300 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A0A6YYH2 397 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 A6NJ64 397 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 CD74P04233 296 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 RAB2AP61019 212 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 HHEXQ03014 270 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 TMEM128Q5BJH2 165 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 SKA3Q8IX90 412 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR2I1PQ8NGU4 316 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 GPR119Q8TDV5 335 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 SLC37A2Q8TED4 501 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 NUDT22Q9BRQ3 303 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 GSN-AS1Q9NRJ2 163 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 RCC2Q9P258 522 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 C14orf166Q9Y224 244 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 A0A1W2PPH5 198 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 OPN1LWP04000 364 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 ASAH2BP0C7U1 165 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 LPAR6P43657 344 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 CAV2P51636 162 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF565Q8N9K5 539 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 SCGB3A2Q96PL1 93 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 NICN1Q9BSH3 213 aa11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 PUS1Q9Y606 427 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAPPC9-208ENST00000520857 TRAV36DV7A0A075B6V5 113 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 RAB27BO00194 218 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 IFNA21P01568 189 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 ZNF44P15621 663 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 CD1CP29017 333 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 CRABP1P29762 137 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 GAB4Q2WGN9 574 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 GLIPR1L1Q6UWM5 242 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 ABHD12BQ7Z5M8 362 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 SLC22A24Q8N4F4 322 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 WDSUB1Q8N9V3 476 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 NAXEQ8NCW5 288 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 OR5D14Q8NGL3 314 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 MFSD8Q8NHS3 518 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 OBSL1O75147 1896 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 NUDT19A8MXV4 375 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 TGFBR3LH3BV60 316 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 NME1P15531 152 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 PGCP20142 388 aa11.47□□□□□ -0.57
TRAPPC9-208ENST00000520857 ARL4DP49703 201 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms