RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 POU2F3Q9UKI9 436 aa12.24□□□□□ -0.45
SDC2-203ENST00000519587 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
SDC2-203ENST00000519587 R4GMQ9 66 aa12.24□□□□□ -0.45
SDC2-203ENST00000519587 ADGRG4Q8IZF6 3080 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 DPRXA6NFQ7 191 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 DEFB108AA8MXU0 73 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ATP6V1G2-DDX39BF2Z307 99 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 LCATP04180 440 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 RPSAP08865 295 aaKnown RBP12.23□□□□□ -0.45
SDC2-203ENST00000519587 HTR1AP08908 422 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 CCL2P13500 99 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ZNF35P13682 527 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 TUBG1P23258 451 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 MALLQ13021 153 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 IRF3Q14653 427 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 DAZAP2Q15038 168 aaPredicted RBP12.23□□□□□ -0.45
SDC2-203ENST00000519587 CCDC58Q4VC31 144 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 OR2G6Q5TZ20 316 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ZNF367Q7RTV3 350 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ABHD4Q8TB40 342 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 SPRYD4Q8WW59 207 aaPredicted RBP12.23□□□□□ -0.45
SDC2-203ENST00000519587 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 PGAM5Q96HS1 289 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ZNF649Q9BS31 505 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 OR10A2Q9H208 303 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 OPA3Q9H6K4 179 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 TUBG2Q9NRH3 451 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 NUFIP1Q9UHK0 495 aaKnown RBP12.23□□□□□ -0.45
SDC2-203ENST00000519587 CLEC2DQ9UHP7 191 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 ZNF391Q9UJN7 358 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 CADP27708 2225 aa12.23□□□□□ -0.45
SDC2-203ENST00000519587 PLCE1Q9P212 2302 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 PKDREJQ9NTG1 2253 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 A6NNC1 897 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 VSTM5A8MXK1 200 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 H3BSA7 217 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 MAGEB4O15481 346 aaPredicted RBP12.22□□□□□ -0.45
SDC2-203ENST00000519587 TBX1O43435 398 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 XRCC2O43543 280 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 SMPD2O60906 423 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 ADRA2AP08913 450 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 NR4A1P22736 598 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 CFL1P23528 166 aaKnown RBP12.22□□□□□ -0.45
SDC2-203ENST00000519587 CALCRP30988 508 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 TGM4P49221 684 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 CDH15P55291 814 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 BDH1Q02338 343 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
SDC2-203ENST00000519587 SPHARQ15513 63 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 FDX2Q6P4F2 183 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 FAM57BQ71RH2 274 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 PAQR4Q8N4S7 273 aaPredicted RBP12.22□□□□□ -0.45
SDC2-203ENST00000519587 NUP37Q8NFH4 326 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 PELI1Q96FA3 418 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 RGCCQ9H4X1 137 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
SDC2-203ENST00000519587 BRD7Q9NPI1 651 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 FAM206AQ9NX38 181 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 BABAM2Q9NXR7 383 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 CRYBG3Q68DQ2 2970 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 RTTNQ86VV8 2226 aa12.22□□□□□ -0.45
SDC2-203ENST00000519587 MAGEA13PA6NCF6 341 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 LCKP06239 509 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 FAM157BP0CG42 384 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 UBCP0CG48 685 aaKnown RBP12.21□□□□□ -0.45
SDC2-203ENST00000519587 WNT5AP41221 380 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 UCP2P55851 309 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 PPP1CBP62140 327 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 HGFACQ04756 655 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 MFGE8Q08431 387 aaPredicted RBP12.21□□□□□ -0.45
SDC2-203ENST00000519587 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 MED22Q15528 200 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 TIGD6Q17RP2 521 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 RSPO1Q2MKA7 263 aaPredicted RBP12.21□□□□□ -0.45
SDC2-203ENST00000519587 COLCA1Q6ZS62 124 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 COMMD2Q86X83 199 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 KLBQ86Z14 1044 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 SPARTQ8N0X7 666 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 GATAD2BQ8WXI9 593 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 RORBQ92753 470 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 COMMD4Q9H0A8 199 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 OR51B6Q9H340 312 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 ACOT13Q9NPJ3 140 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 OR52A1Q9UKL2 312 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 ATP23Q9Y6H3 246 aa12.21□□□□□ -0.45
SDC2-203ENST00000519587 TMEM212A6NML5 194 aa12.2□□□□□ -0.46
SDC2-203ENST00000519587 SRSF10O75494 262 aaKnown RBP12.2□□□□□ -0.46
SDC2-203ENST00000519587 SLC2A1P11166 492 aa12.2□□□□□ -0.46
SDC2-203ENST00000519587 PSMB10P40306 273 aa12.2□□□□□ -0.46
SDC2-203ENST00000519587 MAP2K4P45985 399 aa12.2□□□□□ -0.46
SDC2-203ENST00000519587 CCR9P51686 369 aa12.2□□□□□ -0.46
SDC2-203ENST00000519587 EMX1Q04741 257 aaPredicted RBP12.2□□□□□ -0.46
SDC2-203ENST00000519587 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
SDC2-203ENST00000519587 SP5Q6BEB4 398 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms