RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ERVW-1Q9UQF0 538 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 ARL2BPQ9Y2Y0 163 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 OARD1Q9Y530 152 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 WIF1Q9Y5W5 379 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PEX16Q9Y5Y5 336 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 CHD2O14647 1828 aaKnown RBP2.53□□□□□ -2
VPS13B-207ENST00000518569 RGPD1P0DJD0 1748 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 UTRNP46939 3433 aa2.53□□□□□ -2
VPS13B-207ENST00000518569 PLXNC1O60486 1568 aa2.53□□□□□ -2.01
VPS13B-207ENST00000518569 NWD1Q149M9 1564 aa2.53□□□□□ -2.01
VPS13B-207ENST00000518569 FAM135AQ9P2D6 1515 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ADGRL3Q9HAR2 1447 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MN1Q10571 1320 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1B0GV72 72 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 PSMB11A5LHX3 300 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 FAM231BA6NCW3 169 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF705EA8MWA4 302 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 F8VP50 259 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 H7C0C1 242 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SIRPB1O00241 398 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 DLGAP1O14490 977 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 EFNA2O43921 213 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 UGT2B17O75795 530 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SRP72O76094 671 aaKnown RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ACTL6AO96019 429 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 IFNA5P01569 189 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 HLA-HP01893 362 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 FGGP02679 453 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 H2BFMP0C1H6 154 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 GFAPP14136 432 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 UCHL3P15374 230 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CD1EP15812 388 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CBR1P16152 277 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 TBXA2RP21731 343 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 G0S2P27469 103 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 HLA-DMAP28067 261 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 HTR2CP28335 458 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 GABRR2P28476 465 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CSKP41240 450 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 BTDP43251 543 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MAGEA5P43359 124 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 GPR1P46091 355 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CAPZBP47756 277 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 EFNB2P52799 333 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 NKX2-5P52952 324 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 AP2S1P53680 142 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 UGT2B15P54855 530 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 GNB2P62879 340 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CCL7P80098 99 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SIGLEC14Q08ET2 396 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 RAB40BQ12829 278 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 TIGITQ495A1 244 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 PDZD11Q5EBL8 140 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SDHAF4Q5VUM1 108 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ACSM5Q6NUN0 579 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 WDR74Q6RFH5 385 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ABHD13Q7L211 337 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 TMED4Q7Z7H5 227 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SETD3Q86TU7 594 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 FUNDC1Q8IVP5 155 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 Q8N402 240 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MFSD9Q8NBP5 474 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF738Q8NE65 137 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 OR8K1Q8NGG5 319 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 RNASE11Q8TAA1 199 aaKnown RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ACTL9Q8TC94 416 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 DYNC2LI1Q8TCX1 351 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 TCP10LQ8TDR4 215 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 RPL3LQ92901 407 aaKnown RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MCHR1Q99705 422 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 PARD6GQ9BYG4 376 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SRXN1Q9BYN0 137 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CHIAQ9BZP6 476 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 ING2Q9H160 280 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 OR2AG1Q9H205 316 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 KIR3DX1Q9H7L2 352 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 PTGES2Q9H7Z7 377 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 C6orf50Q9HD87 102 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 RAB18Q9NP72 206 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CTPS2Q9NRF8 586 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SLC2A9Q9NRM0 540 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SPANXB1Q9NS25 103 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-207ENST00000518569 PARVAQ9NVD7 372 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 FGFR1OP2Q9NVK5 253 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 GPATCH2LQ9NWQ4 482 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 C1orf109Q9NX04 203 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MARCH5Q9NX47 278 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CMTM6Q9NX76 183 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 B3GNT2Q9NY97 397 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 BFARQ9NZS9 450 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 SCML1Q9UN30 329 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 CROCCQ5TZA2 2017 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 DIP2AQ14689 1571 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MED14O60244 1454 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 MLH3Q9UHC1 1453 aa2.52□□□□□ -2.01
VPS13B-207ENST00000518569 FAM135BQ49AJ0 1406 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TNS1Q9HBL0 1735 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PIK3C2BO00750 1634 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms