RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 H3BSA7 217 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 M0R129 80 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 MLNRO43193 412 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 OSMP13725 252 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 ZNF3P17036 446 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 SRD5A1P18405 259 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 GRK5P34947 590 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 LIPAP38571 399 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 DAPP51397 102 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 HCCSP53701 268 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 ZNF92Q03936 586 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 EIF2B1Q14232 305 aaKnown RBP9.71□□□□□ -0.86
VCAN-212ENST00000515397 KLHL12Q53G59 568 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 FAM201AQ5SY85 155 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 SLC27A4Q6P1M0 643 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 CPOQ8IVL8 374 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 OR8G5Q8NG78 346 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 OR6N2Q8NGY6 317 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 RAB1CQ92928 201 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 DVL3Q92997 716 aaPredicted RBP9.71□□□□□ -0.86
VCAN-212ENST00000515397 UTP4Q969X6 686 aaKnown RBP9.71□□□□□ -0.86
VCAN-212ENST00000515397 COG8Q96MW5 612 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 ZNF582Q96NG8 517 aaPredicted RBP9.71□□□□□ -0.86
VCAN-212ENST00000515397 AMELYQ99218 206 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 GAL3ST1Q99999 423 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 ZNF556Q9HAH1 456 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 BRD7Q9NPI1 651 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 DNAJC27Q9NZQ0 273 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 ATPIF1Q9UII2 106 aa9.71□□□□□ -0.86
VCAN-212ENST00000515397 TMEFF2Q9UIK5 374 aaPredicted RBP9.71□□□□□ -0.86
VCAN-212ENST00000515397 ARRDC5A6NEK1 342 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 PRR23D1E9PI22 279 aaPredicted RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 SURF4O15260 269 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 PLPP2O43688 288 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 SELENOFO60613 162 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 CYB5R3P00387 301 aaPredicted RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 MSMBP08118 114 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 CD55P08174 381 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 ADH4P08319 380 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 FAM157CP0CG43 387 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 PRR23D2P0DMB1 279 aaPredicted RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 TNFSF4P23510 183 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 GSTT1P30711 240 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 PMELP40967 661 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 NAA10P41227 235 aaPredicted RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 CDK5Q00535 292 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 ECH1Q13011 328 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 MALLQ13021 153 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 GLYATL3Q5SZD4 288 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 C1orf146Q5VVC0 180 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 FAHD2BQ6P2I3 314 aaPredicted RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 SHQ1Q6PI26 577 aaKnown RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 BCDIN3DQ7Z5W3 292 aaKnown RBP9.7□□□□□ -0.86
VCAN-212ENST00000515397 ZNF283Q8N7M2 679 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 C19orf18Q8NEA5 215 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 OR13G1Q8NGZ3 307 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 ST7LQ8TDW4 575 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 LRTOMTQ8WZ04 291 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 SPTSSAQ969W0 71 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 FAHD2AQ96GK7 314 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 TIMD4Q96H15 378 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 C1orf159Q96HA4 380 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 DIRC2Q96SL1 478 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 INTS14Q96SY0 518 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 ABHD6Q9BV23 337 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 YY1AP1Q9H869 796 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 TMEM106BQ9NUM4 274 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 TMEM100Q9NV29 134 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 TMEM160Q9NX00 188 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 TVP23BQ9NYZ1 205 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 KIF17Q9P2E2 1029 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 PPP1R3CQ9UQK1 317 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 DYSFO75923 2080 aa9.7□□□□□ -0.86
VCAN-212ENST00000515397 IQCF6A8MYZ5 107 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 TBX1O43435 398 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 DEAF1O75398 565 aaPredicted RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 RGS9O75916 674 aaPredicted RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 GLCEO94923 617 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 AVPP01185 164 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 IFNA2P01563 188 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 IGHV2-5P01817 119 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 ANXA8P13928 327 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 TUBG1P23258 451 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 CA6P23280 308 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 ZFP36P26651 326 aaKnown RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 EPHA2P29317 976 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 SRP14P37108 136 aaKnown RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 RASSF2P50749 326 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 RPS7P62081 194 aaKnown RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 LCN2P80188 198 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 SNAPC1Q16533 368 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 PCK2Q16822 640 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 ZMAT1Q5H9K5 638 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 PRAMEF6Q5VXH4 476 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 PGAP1Q75T13 922 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 MRPL21Q7Z2W9 205 aaKnown RBP9.69□□□□□ -0.86
VCAN-212ENST00000515397 MOGAT3Q86VF5 341 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 TIGD4Q8IY51 512 aa9.69□□□□□ -0.86
VCAN-212ENST00000515397 THEM6Q8WUY1 208 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms