RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 UBBP0CG47 229 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 ZP3P21754 424 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 PTGDSP41222 190 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 RPS27AP62979 156 aaKnown RBP12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 UBA52P62987 128 aaKnown RBP12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 DHRS2Q13268 280 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 KCNMB1Q16558 191 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 FAHD2BQ6P2I3 314 aaPredicted RBP12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 SLC25A47Q6Q0C1 308 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 ALKAL2Q6UX46 152 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 ZNF546Q86UE3 836 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 PDZD9Q8IXQ8 264 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 PAQR4Q8N4S7 273 aaPredicted RBP12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 OR52N4Q8NGI2 321 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 OR13C8Q8NGS7 320 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 OR6X1Q8NH79 312 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 FAHD2AQ96GK7 314 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 SEC61A2Q9H9S3 476 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 COMMD9Q9P000 198 aa12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
AP003555.1-202ENST00000511013 PHF3Q92576 2039 aaKnown RBP12.65□□□□□ -0.39
AP003555.1-202ENST00000511013 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 TLX3O43711 291 aaPredicted RBP12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 VSIG8P0DPA2 414 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 SLC25A4P12235 298 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 MGMTP16455 207 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 HLA-GP17693 338 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 EIF1P41567 113 aaKnown RBP12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 ZNF239Q16600 458 aaKnown RBP12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 TMPRSS9Q7Z410 1059 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR5M9Q8NGP3 310 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 CCDC120Q96HB5 630 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 DEFB126Q9BYW3 111 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 HDGFL3Q9Y3E1 203 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 B3GALT1Q9Y5Z6 326 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 LHFPL6Q9Y693 200 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 SDK1Q7Z5N4 2213 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 LOC102725191A0A1B0GVB3 256 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR5H14A6NHG9 310 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 ZNF726A6NNF4 738 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 KRBOX1C9JBD0 128 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 TIAF1O95411 115 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 IFNA6P05013 189 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 NR2C1P13056 603 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 ADH6P28332 368 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 ZNF93P35789 620 aaPredicted RBP12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 CXCL12P48061 93 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 GABREP78334 506 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 UNC119Q13432 240 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 ZNF660Q6AZW8 331 aaPredicted RBP12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 ANGPTL5Q86XS5 388 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR4S1Q8NGB4 309 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR10G3Q8NGC4 313 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR4K17Q8NGC6 315 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR51E1Q8TCB6 317 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 WBP1Q96G27 269 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 OR5B2Q96R09 309 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 SLC26A1Q9H2B4 701 aa12.64□□□□□ -0.39
AP003555.1-202ENST00000511013 CACNA1EQ15878 2313 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 TRAV14DV4A0A0A6YYC5 116 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 TMEM14DPA8MWL7 114 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 TP53I11O14683 189 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 TRAF3IP2O43734 574 aaPredicted RBP12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 OR2J2O76002 312 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 OR2F2O95006 317 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 IL2RAP01589 272 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 HLA-AP01891 365 aaKnown RBP12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 CSN2P05814 226 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 ZNF43P17038 809 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 ZBTB25P24278 435 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 MPGP29372 298 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 NUP62P37198 522 aaPredicted RBP12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 P2RY4P51582 365 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 CCL7P80098 99 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 OR2F1Q13607 317 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 NKPD1Q17RQ9 610 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 AWAT2Q6E213 333 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 CFAP77Q6ZQR2 320 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 CD163Q86VB7 1156 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 CLDN23Q96B33 292 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 SLC25A32Q9H2D1 315 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 PPA2Q9H2U2 334 aa12.63□□□□□ -0.39
AP003555.1-202ENST00000511013 VSIG4Q9Y279 399 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms