RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
SERF1B-204ENST00000506542 MFGE8Q08431 387 aaPredicted RBP12.11□□□□□ -0.47
SERF1B-204ENST00000506542 WDR38Q5JTN6 314 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 CEACAM19Q7Z692 300 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 TMEM200AQ86VY9 491 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.11□□□□□ -0.47
SERF1B-204ENST00000506542 RGP1Q92546 391 aaPredicted RBP12.11□□□□□ -0.47
SERF1B-204ENST00000506542 WFIKKN1Q96NZ8 548 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 NXF2Q9GZY0 626 aaKnown RBP12.11□□□□□ -0.47
SERF1B-204ENST00000506542 LIME1Q9H400 295 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 PNRC2Q9NPJ4 139 aaKnown RBP12.11□□□□□ -0.47
SERF1B-204ENST00000506542 GLRX2Q9NS18 164 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 CENPMQ9NSP4 180 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 FBXL3Q9UKT7 428 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 R4GMQ9 66 aa12.11□□□□□ -0.47
SERF1B-204ENST00000506542 SHISA3A0PJX4 238 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 RPL36A-HNRNPH2H7BZ11 118 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 RER1O15258 196 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
SERF1B-204ENST00000506542 KRT33AO76009 404 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 PEX19P40855 299 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 HIST1H3AP68431 136 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 NRN1LQ496H8 165 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 ZMAT1Q5H9K5 638 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 HIST2H3PS2Q5TEC6 136 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 ALKBH2Q6NS38 261 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 PAMR1Q6UXH9 720 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 STAC2Q6ZMT1 411 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 LINC00299Q6ZSB3 139 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 HIST2H3AQ71DI3 136 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 CATSPERDQ86XM0 798 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 LURAP1Q96LR2 239 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 FOXB1Q99853 325 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 COMMD4Q9H0A8 199 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 PPIL3Q9H2H8 161 aaKnown RBP12.1□□□□□ -0.47
SERF1B-204ENST00000506542 SNTG1Q9NSN8 517 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 ROS1P08922 2347 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 A0A1W2PPR1 153 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 SIAH2O43255 324 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 CST2P09228 141 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 B4GALT1P15291 398 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 MTNR1BP49286 362 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 MMP16P51512 607 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
SERF1B-204ENST00000506542 MXD1Q05195 221 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF829Q3KNS6 432 aaPredicted RBP12.1□□□□□ -0.47
SERF1B-204ENST00000506542 FAM27D1Q5T7N8 215 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 UNQ9370/PRO34162Q6UXP9 181 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 CXorf67Q86X51 503 aaPredicted RBP12.1□□□□□ -0.47
SERF1B-204ENST00000506542 LRRC18Q8N456 261 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 IL17RDQ8NFM7 739 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 PHYHIPQ92561 330 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 SLC25A46Q96AG3 418 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 OR14A2Q96R54 314 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 BARHL1Q9BZE3 327 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 MMP27Q9H306 513 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 NIPAL2Q9H841 368 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 G6PC2Q9NQR9 355 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 DDX28Q9NUL7 540 aaKnown RBP12.1□□□□□ -0.47
SERF1B-204ENST00000506542 KCNN3Q9UGI6 736 aa12.1□□□□□ -0.47
SERF1B-204ENST00000506542 TMEM269A0A1B0GVZ9 245 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 LOC110117498-PIK3R3F6TDL0 507 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 CASKO14936 926 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 UCHL1P09936 223 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 CLEC2LP0C7M8 214 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 CALRP27797 417 aaKnown RBP12.09□□□□□ -0.47
SERF1B-204ENST00000506542 RORCP51449 518 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 KLHL24Q6TFL4 600 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 ZNF676Q8N7Q3 588 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 FBXO17Q96EF6 278 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 C14orf79Q96F83 325 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 TPK1Q9H3S4 243 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 SLC22A13Q9Y226 551 aa12.09□□□□□ -0.47
SERF1B-204ENST00000506542 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 A6NNC1 897 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 CTAG2O75638 210 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 THBDP07204 575 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 MYL9P24844 172 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 SSTR2P30874 369 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
SERF1B-204ENST00000506542 GRB2P62993 217 aaKnown RBP12.08□□□□□ -0.48
SERF1B-204ENST00000506542 SORDQ00796 357 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 HNRNPA0Q13151 305 aaKnown RBP12.08□□□□□ -0.48
SERF1B-204ENST00000506542 TAF13Q15543 124 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 Q499Y3 187 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 ZNF813Q6ZN06 617 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 SYT9Q86SS6 491 aa12.08□□□□□ -0.48
SERF1B-204ENST00000506542 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms