RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 RPS19BP1Q86WX3 136 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 TTLQ8NG68 377 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 FAM45AQ8TCE6 357 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ANKRD7Q92527 254 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 TM4SF19Q96DZ7 209 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 C14orf79Q96F83 325 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 CERS2Q96G23 380 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 MS4A14Q96JA4 679 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 SAMD8Q96LT4 415 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 CCDC77Q9BR77 488 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 COMMD4Q9H0A8 199 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ISG20L2Q9H9L3 353 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ROPN1Q9HAT0 212 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 LPAR2Q9HBW0 351 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 MRPS33Q9Y291 106 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 C2CD3Q4AC94 2353 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 USP27XA6NNY8 438 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 GABRR3A8MPY1 467 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 KLRC4-KLRK1H3BQV0 150 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 CHST10O43529 356 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 SLC19A2O60779 497 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 B4GALT2O60909 372 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 RDH16O75452 317 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 GUCA1CO95843 209 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 TSPAN12O95859 305 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 ACTL6AO96019 429 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 F10P00742 488 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 KRT6AP02538 564 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 STATHP02808 62 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 KRT6BP04259 564 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 SERPINA6P08185 405 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 RRASP10301 218 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 BCKDHAP12694 445 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 ABOP16442 354 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 MGMTP16455 207 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF24P17028 368 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 CCNA2P20248 432 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 HTR1EP28566 365 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 CA7P43166 264 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 KRT6CP48668 564 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 HLCSP50747 726 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 TDGF1P3P51864 188 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 CDKN2DP55273 166 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF630Q2M218 657 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-203ENST00000503274 DEFB134Q4QY38 66 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 LANCL3Q6ZV70 420 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 VN1R4Q7Z5H5 301 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 THOC6Q86W42 341 aaKnown RBP3.93□□□□□ -1.78
NIPBL-203ENST00000503274 CRLF3Q8IUI8 442 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 TCAIMQ8N3R3 496 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 TMEM156Q8N614 296 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 BBOF1Q8ND07 529 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF740Q8NDX6 193 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 NT5CQ8TCD5 201 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 GIPC3Q8TF64 312 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 SLC5A11Q8WWX8 675 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 CDKL2Q92772 493 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 PINX1Q96BK5 328 aaKnown RBP3.93□□□□□ -1.78
NIPBL-203ENST00000503274 UPRTQ96BW1 309 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 RAB17Q9H0T7 212 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 RNF14Q9UBS8 474 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 SNX12Q9UMY4 172 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 NPIPA1Q9UND3 350 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 KLF13Q9Y2Y9 288 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-203ENST00000503274 MMACHCQ9Y4U1 282 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 SPACA6W5XKT8 324 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 PRRC2AP48634 2157 aaKnown RBP3.93□□□□□ -1.78
NIPBL-203ENST00000503274 FBN2P35556 2912 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 HIVEP1P15822 2718 aa3.93□□□□□ -1.78
NIPBL-203ENST00000503274 FAM231BA6NCW3 169 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF860A6NHJ4 632 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 SEC22BO75396 215 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 IFNA16P05015 189 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 C1GALT1C1LP0DN25 315 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 UQCRBP14927 111 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 HSD17B7P56937 341 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 RAB8AP61006 207 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 BTN3A2P78410 334 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 DR1Q01658 176 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 BIKQ13323 160 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 CDKL4Q5MAI5 379 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 FAM120AOSQ5T036 256 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 TRIM40Q6P9F5 258 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 TMIGD1Q6UXZ0 262 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 MBOAT1Q6ZNC8 495 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 RGS9BPQ6ZS82 235 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 PRSS41Q7RTY9 318 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 SLC35F6Q8N357 371 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 MDS2Q8NDY4 140 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 CA5BP1Q8WTZ4 195 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 ITLN2Q8WWU7 325 aaPredicted RBP3.92□□□□□ -1.78
NIPBL-203ENST00000503274 NEIL2Q969S2 332 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 UBE2E3Q969T4 207 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 TSNARE1Q96NA8 513 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 CENPKQ9BS16 269 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 ROGDIQ9GZN7 287 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 RHBGQ9H310 441 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 POPDC3Q9HBV1 291 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 YAE1D1Q9NRH1 226 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 SH3BGRL2Q9UJC5 107 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms