RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CD200P41217 278 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 CENPAP49450 140 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 WDR4P57081 412 aaKnown RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 KLRD1Q13241 179 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 SELPLGQ14242 412 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 CCDC92Q53HC0 331 aaPredicted RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 ZBTB37Q5TC79 503 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 C11orf88Q6PI97 169 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 OAFQ86UD1 273 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 CMTM4Q8IZR5 234 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 CELF2-AS1Q8N7Q2 184 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 NPRL2Q8WTW4 380 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 SPRYD4Q8WW59 207 aaPredicted RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 ZNF570Q96NI8 536 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 ADAT1Q9BUB4 502 aaKnown RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 POLR2J2Q9GZM3 115 aaKnown RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 POLR2J3Q9H1A7 115 aaKnown RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 CNTD2Q9H8S5 307 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 NOP16Q9Y3C1 178 aaKnown RBP9.59□□□□□ -0.87
CDK9-205ENST00000498339 KPTNQ9Y664 436 aa9.59□□□□□ -0.87
CDK9-205ENST00000498339 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 MEIOCA2RUB1 952 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 RNASEK-C17orf49H0YIS7 233 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 H3BUX3 64 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 NDUFA2O43678 99 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 ECDO95905 644 aaPredicted RBP9.58□□□□□ -0.88
CDK9-205ENST00000498339 CTLA4P16410 223 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 OR1E2P47887 323 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 SLC9A3P48764 834 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 MRPL19P49406 292 aaKnown RBP9.58□□□□□ -0.88
CDK9-205ENST00000498339 EFNB2P52799 333 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 POU4F2Q12837 409 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 MALLQ13021 153 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 LY6EQ16553 131 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 FOXB2Q5VYV0 432 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 EPGNQ6UW88 154 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 MRPL21Q7Z2W9 205 aaKnown RBP9.58□□□□□ -0.88
CDK9-205ENST00000498339 OR13C2Q8NGS9 318 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 R3HDM4Q96D70 268 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 NDEL1Q9GZM8 345 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 HDHD2Q9H0R4 259 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 C1orf123Q9NWV4 160 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 ATPIF1Q9UII2 106 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 RPUSD1Q9UJJ7 312 aaKnown RBP9.58□□□□□ -0.88
CDK9-205ENST00000498339 RPS6KA6Q9UK32 745 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 BAG5Q9UL15 447 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 AURKCQ9UQB9 309 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 ADAM18Q9Y3Q7 739 aa9.58□□□□□ -0.88
CDK9-205ENST00000498339 IGHV3OR15-7A0A075B7D8 119 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 EFCAB9A8MZ26 197 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 ANGPT2O15123 496 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 SLC16A7O60669 478 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 FBXO24O75426 580 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 GRPP07492 148 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 CA6P23280 308 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 IFNA8P32881 189 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 SAA4P35542 130 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 DLX1P56177 255 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 ECH1Q13011 328 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 GK2Q14410 553 aaPredicted RBP9.57□□□□□ -0.88
CDK9-205ENST00000498339 MESTQ5EB52 335 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 PGAP1Q75T13 922 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 GLB1L2Q8IW92 636 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 FGFRL1Q8N441 504 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 PNKDQ8N490 385 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 LRRC75AQ8NAA5 344 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 OR10A6Q8NH74 314 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 LRRC8CQ8TDW0 803 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 CFHR4Q92496 578 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 Q96M85 177 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 CGREF1Q99674 301 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 COQ7Q99807 217 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 MMP28Q9H239 520 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 NKIRAS1Q9NYS0 192 aa9.57□□□□□ -0.88
CDK9-205ENST00000498339 COA3Q9Y2R0 106 aaPredicted RBP9.57□□□□□ -0.88
CDK9-205ENST00000498339 PRSS37A4D1T9 235 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 F5H5K5 113 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 KHDRBS3O75525 346 aaKnown RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 CD33P20138 364 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 LSM6P62312 80 aaKnown RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 ST3GAL3Q11203 375 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 KRR1Q13601 381 aaKnown RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 NFYCQ13952 458 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 VMACQ2NL98 169 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 DEFB121Q5J5C9 76 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 METAP1DQ6UB28 335 aaPredicted RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 CCBE1Q6UXH8 406 aaPredicted RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 CALHM3Q86XJ0 350 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 FAM90A1Q86YD7 464 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 NRMQ8IXM6 262 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 LNX2Q8N448 690 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 GJC3Q8NFK1 279 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 OR51G2Q8NGK0 314 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 PPP1R35Q8TAP8 253 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 LZICQ8WZA0 190 aa9.56□□□□□ -0.88
CDK9-205ENST00000498339 H1FXQ92522 213 aaKnown RBP9.56□□□□□ -0.88
CDK9-205ENST00000498339 SLCO4A1Q96BD0 722 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms