RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SLC18B1Q6NT16 456 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 NHLRC1Q6VVB1 395 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CREB3L2Q70SY1 520 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 DPY19L4Q7Z388 723 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 KRT77Q7Z794 578 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CDC20BQ86Y33 519 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GLB1L2Q8IW92 636 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TIGD4Q8IY51 512 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 UBQLNLQ8IYU4 475 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 FAM109AQ8N4B1 249 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ZADH2Q8N4Q0 377 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM251Q8N6I4 163 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 YIPF7Q8N8F6 280 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ZFP62Q8NB50 900 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 NOXO1Q8NFA2 376 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 FDCSPQ8NFU4 85 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 OR9K2Q8NGE7 335 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 OR6N1Q8NGY5 312 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 OTOSQ8NHW6 89 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 DYNC2LI1Q8TCX1 351 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 C17orf50Q8WW18 174 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 RPL3LQ92901 407 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 CPNE4Q96A23 557 aaPredicted RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 KCTD7Q96MP8 289 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 SLX1AQ9BQ83 275 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 NEURL2Q9BR09 285 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 TTYH2Q9BSA4 534 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 EMC6Q9BV81 110 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 MRPL13Q9BYD1 178 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 PRRG4Q9BZD6 226 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 MMP27Q9H306 513 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 LDAHQ9H6V9 325 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 EXO5Q9H790 373 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ISG20L2Q9H9L3 353 aaKnown RBP4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ACKR4Q9NPB9 350 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 B3GAT2Q9NPZ5 323 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 B3GAT1Q9P2W7 334 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 KCNG2Q9UJ96 466 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 GNG8Q9UK08 70 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 IKZF2Q9UKS7 526 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 A3GALT2U3KPV4 340 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 MPDZO75970 2070 aa4.67□□□□□ -1.66
HMGXB4-208ENST00000498325 ARPC4-TTLL3A0A0A6YYG9 625 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 TRGV5A0A0B4J1U4 118 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 TRBV2A0A0J9YWF9 115 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ISPDA4D126 451 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 FAM166BA8MTA8 275 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF814B7Z6K7 855 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 PRSS44E7EML9 344 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 AQP7O14520 342 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CASKO14936 926 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SMAD9O15198 467 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC43A1O75387 559 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF254O75437 659 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CEACAM4O75871 244 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ARL6IP5O75915 188 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF432O94892 652 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CDRT1O95170 752 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 LALBAP00709 142 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 QDPRP09417 244 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SPARCP09486 303 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 PGA4P0DJD7 388 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 PGA3P0DJD8 388 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CTLA4P16410 223 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 S100A5P33763 92 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CD79BP40259 229 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CSNK1A1P48729 337 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 STARP49675 285 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 EIF2B2P49770 351 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 GDI2P50395 445 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 RORCP51449 518 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF84P51523 738 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 RIDAP52758 137 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SUCLG1P53597 346 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CLDN15P56746 228 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 RPS25P62851 125 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 FABP5Q01469 135 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC3A1Q07837 685 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ALKBH1Q13686 389 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 EIF2B1Q14232 305 aaKnown RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC17A1Q14916 467 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ETFDHQ16134 617 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 HIST3H3Q16695 136 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF404Q494X3 552 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF684Q5T5D7 378 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 DMKNQ6E0U4 476 aaPredicted RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 C22orf42Q6IC83 251 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM53Q6P2H8 277 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC25A47Q6Q0C1 308 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 CD200R1LQ6Q8B3 271 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 DEGS2Q6QHC5 323 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ARL9Q6T311 187 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 FCRLAQ7L513 359 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SSX6Q7RTT6 188 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 THNSL2Q86YJ6 484 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF679Q8IYX0 411 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 ZFP41Q8N8Y5 198 aa4.66□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC26A10Q8NG04 563 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms