RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GMPPAQ96IJ6 420 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 TMEM237Q96Q45 408 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GORASP1Q9BQQ3 440 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NICN1Q9BSH3 213 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TARS2Q9BW92 718 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 SLC46A2Q9BY10 475 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TP63Q9H3D4 680 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 C11orf68Q9H3H3 251 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 TMEM9BQ9NQ34 198 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SLC2A9Q9NRM0 540 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TMEM248Q9NWD8 314 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 RASL12Q9NYN1 266 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MRPL15Q9P015 296 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 DHCR7Q9UBM7 475 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 AASSQ9UDR5 926 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MOSPD1Q9UJG1 213 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KLK13Q9UKR3 277 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 BOKQ9UMX3 212 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 NOSIPQ9Y314 301 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 EMC9Q9Y3B6 208 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GOLT1BQ9Y3E0 138 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SNX10Q9Y5X0 201 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ARL5AQ9Y689 179 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD31Q8N7Z5 1873 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 UTYO14607 1347 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ROBO3Q96MS0 1386 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MED12LQ86YW9 2145 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MAP1AP78559 2803 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 SHROOM3Q8TF72 1996 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 IQCMA0A1B0GVH7 501 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KRTAP9-7A8MTY7 169 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 A8MVM7 634 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TULP2O00295 520 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HMGB3O15347 200 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 TSPAN6O43657 245 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CREB3O43889 395 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 AGTP01019 485 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 THY1P04216 161 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CAPN1P07384 714 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SLC2A3P11169 496 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 EGR1P18146 543 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 FDXRP22570 491 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HOXA6P31267 233 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GTF2H1P32780 548 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HTR7P34969 479 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ETV4P43268 484 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 RABGGTBP53611 331 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 RRAS2P62070 204 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 XIAPP98170 497 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CLCQ05315 142 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C12orf74Q32Q52 190 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TMEM196Q5HYL7 178 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MANEALQ5VSG8 457 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MON1AQ86VX9 555 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 POM121L12Q8N7R1 296 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NKAPP1Q8N9T2 125 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR11H4Q8NGC9 324 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR4C16Q8NGL9 310 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR2W6PQ8NHA6 318 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CT55Q8WUE5 264 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HAUS1Q96CS2 278 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PPM1MQ96MI6 270 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ATP5SQ99766 215 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SULT4A1Q9BR01 284 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 UQCC2Q9BRT2 126 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 DPH7Q9BTV6 452 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 METTL9Q9H1A3 318 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SYNPO2LQ9H987 977 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 VTA1Q9NP79 307 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KLK11Q9UBX7 282 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 POLG2Q9UHN1 485 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KLK9Q9UKQ9 250 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ERGIC3Q9Y282 383 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 DERAQ9Y315 318 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 FLT1P17948 1338 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 RAD50Q92878 1312 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 A0A0U1RQV1 116 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C1orf232A0A0U1RR37 186 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ZNF320A2RRD8 509 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 DNAJC9-AS1A6NH13 148 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ANXA2P2A6NMY6 339 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MID1O15344 667 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CD3EAPO15446 510 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 RNF113AO15541 343 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 EMC8O43402 210 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 COCHO43405 550 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TIMM17BO60830 172 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 IFNA21P01568 189 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HLA-DQA1P01909 254 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CD3GP09693 182 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ACYP2P14621 99 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SPNP16150 400 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HOXB8P17481 243 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 TBPP20226 339 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MDKP21741 143 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 S100GP29377 79 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 S100A7P31151 101 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 AKR1C3P42330 323 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 POLD2P49005 469 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GPR15P49685 360 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms