RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 OR5K2Q8NHB8 316 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 LKAAEAR1Q8TD35 194 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF707Q96C28 371 aaPredicted RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 PIK3IP1Q96FE7 263 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 CERS2Q96G23 380 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 DUS3LQ96G46 650 aaKnown RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 JSRP1Q96MG2 331 aaPredicted RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF681Q96N22 645 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 OR5B12Q96R08 314 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 CAMK2N2Q96S95 79 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 SH3GL3Q99963 347 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 UCK2Q9BZX2 261 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 ACTR3CQ9C0K3 210 aaPredicted RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 SLC7A5P2Q9GIP4 190 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 IL22Q9GZX6 179 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 CLSTN2Q9H4D0 955 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 RGCCQ9H4X1 137 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 TDRD3Q9H7E2 651 aaKnown RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 C8orf33Q9H7E9 229 aaPredicted RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 RETNQ9HD89 108 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 PXMP2Q9NR77 195 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 CCDC59Q9P031 241 aaKnown RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 MYEF2Q9P2K5 600 aaKnown RBP1.31□□□□□ -2.2
VPS26A-208ENST00000497022 LGALS13Q9UHV8 139 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF391Q9UJN7 358 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 GOLT1BQ9Y3E0 138 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 RHBDD3Q9Y3P4 386 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 MROH5Q6ZUA9 1318 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 TMEM94Q12767 1356 aa1.31□□□□□ -2.2
VPS26A-208ENST00000497022 TRAV39A0A0B4J263 110 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 A0A1B0GW55 424 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 LYRM9A8MSI8 78 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 HIDE1A8MVS5 230 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 FAM25EA8MYX2 175 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 BCKDKO14874 412 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 SIVA1O15304 175 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DPM1O60762 260 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CLDN11O75508 207 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 GCM2O75603 506 aaPredicted RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CCNB2O95067 398 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 AIFM1O95831 613 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 SNAI1O95863 264 aaPredicted RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 HLA-HP01893 362 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 APCSP02743 223 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 IFNW1P05000 195 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CRYGCP07315 174 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DUX4L2P0CJ85 424 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DUX4L3P0CJ86 424 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DUX4L5P0CJ88 424 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DUX4L6P0CJ89 424 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DUX4L7P0CJ90 424 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CT45A6P0DMU7 189 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CT45A5P0DMU8 189 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CT45A7P0DMV0 189 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CALM1P0DP23 149 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CALM2P0DP24 149 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CALM3P0DP25 149 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 SRMP19623 302 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 MSR1P21757 451 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CD82P27701 267 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 TNFSF9P41273 254 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 SLC1A2P43004 574 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 BCAP31P51572 246 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CLDN18P56856 261 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 STXBP1P61764 594 aaKnown RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 NUTF2P61970 127 aaKnown RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 SP4Q02446 784 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 MXD1Q05195 221 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 TWF1Q12792 350 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 PIGHQ14442 188 aaPredicted RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 TRAM2Q15035 370 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF726P1Q15940 193 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 PSMD5Q16401 504 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 NKAIN1Q4KMZ8 207 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CT45A1Q5HYN5 189 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 STUMQ69YW2 141 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DNAJC24Q6P3W2 148 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 SPESP1Q6UW49 350 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 MBOAT1Q6ZNC8 495 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 FAM122BQ7Z309 247 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 HDDC2Q7Z4H3 204 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 APRG1Q8IVJ8 170 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 PRELID2Q8N945 189 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 LRRC75AQ8NAA5 344 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 OR56A4Q8NGH8 313 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 OR2A1Q8NGT9 310 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 OR52E5Q8NH55 327 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CT45A3Q8NHU0 189 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 COQ8AQ8NI60 647 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 LINC01560Q8TB33 94 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 NUBPLQ8TB37 319 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 C15orf40Q8WUR7 153 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 KIAA1143Q96AT1 154 aaPredicted RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 CREB3L1Q96BA8 519 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 ECHDC3Q96DC8 303 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 OPALINQ96PE5 141 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 P2RX4Q99571 388 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 KCNJ16Q9NPI9 418 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DDX19AQ9NUU7 478 aaKnown RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 DUX4Q9UBX2 424 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms