RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 TPPPO94811 219 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 RFPL3SP0C7P2 107 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 ITGA3P26006 1051 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 IGFL2Q6UWQ7 119 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 ELMOD2Q8IZ81 293 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 OR6N1Q8NGY5 312 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 TMEM54Q969K7 222 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 FAM3DQ96BQ1 224 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 DEPPQ9NTK1 212 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 DDX28Q9NUL7 540 aaKnown RBP13.76□□□□□ -0.21
SHISA5-216ENST00000494854 STMN3Q9NZ72 180 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 NUBP2Q9Y5Y2 271 aa13.76□□□□□ -0.21
SHISA5-216ENST00000494854 LOC100289279A0A1B0GTE1 492 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 MEGF11A6BM72 1044 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 XRCC3O43542 346 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 LMX1BO60663 402 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 GLSO94925 669 aaPredicted RBP13.75□□□□□ -0.21
SHISA5-216ENST00000494854 WDPCPO95876 746 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 ECDO95905 644 aaPredicted RBP13.75□□□□□ -0.21
SHISA5-216ENST00000494854 TCRBP04435 133 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 ENPP1P22413 925 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 GIFP27352 417 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 RAB25P57735 213 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 RAC3P60763 192 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 PSMA6P60900 246 aaKnown RBP13.75□□□□□ -0.21
SHISA5-216ENST00000494854 SNTB2Q13425 540 aaKnown RBP13.75□□□□□ -0.21
SHISA5-216ENST00000494854 TAF13Q15543 124 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 C2orf76Q3KRA6 126 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 PHYHD1Q5SRE7 291 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 C10orf128Q5T292 105 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 ANKRD16Q6P6B7 361 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 OR51A2Q8NGJ7 313 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 NIPAL2Q9H841 368 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 MOB1AQ9H8S9 216 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 ZNF275Q9NSD4 429 aaPredicted RBP13.75□□□□□ -0.21
SHISA5-216ENST00000494854 COPZ2Q9P299 210 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 RBMX2Q9Y388 322 aaKnown RBP13.75□□□□□ -0.21
SHISA5-216ENST00000494854 N6AMT1Q9Y5N5 214 aa13.75□□□□□ -0.21
SHISA5-216ENST00000494854 TRAV6A0A075B6T7 132 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 RER1O15258 196 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 CTAG2O75638 210 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 F10P00742 488 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 MT-ND4P03905 459 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 CD37P11049 281 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 CNR1P21554 472 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 HTR2CP28335 458 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 ZNF133P52736 654 aaPredicted RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 EFNB2P52799 333 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 IGFBP7Q16270 282 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 LUZP2Q86TE4 346 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 GGNQ86UU5 652 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 TMEM123Q8N131 208 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 ZADH2Q8N4Q0 377 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 Q8NA96 180 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 CACNG6Q9BXT2 260 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 MOV10Q9HCE1 1003 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 RANGRFQ9HD47 186 aaPredicted RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 PNRC2Q9NPJ4 139 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 NUDT15Q9NV35 164 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 MRPL15Q9P015 296 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 LRFN1Q9P244 771 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 KLK11Q9UBX7 282 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 ACOT7O00154 380 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SMAD9O15198 467 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SYT7O43581 403 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 TRAPPC6AO75865 159 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 DHFRP00374 187 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 PTHLHP12272 177 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 GUCA1AP43080 201 aaPredicted RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 CCR6P51684 374 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 AP3S2P59780 193 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 LSM6P62312 80 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SPOCK1Q08629 439 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SGCAQ16586 387 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 ZFP69Q49AA0 526 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 GLYATL3Q5SZD4 288 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 ZIC4Q8N9L1 334 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 DMRTB1Q96MA1 342 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SFXN2Q96NB2 322 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 NKX3-1Q99801 234 aaPredicted RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SF3B5Q9BWJ5 86 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 NELFAQ9H3P2 528 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 KCNK15Q9H427 330 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SLC17A5Q9NRA2 495 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 CGGBP1Q9UFW8 167 aaPredicted RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 MRPS18CQ9Y3D5 142 aaKnown RBP13.74□□□□□ -0.21
SHISA5-216ENST00000494854 SHANK1Q9Y566 2161 aa13.74□□□□□ -0.21
SHISA5-216ENST00000494854 TMEM272A0A1B0GTI8 110 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 PINLYPA6NC86 204 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 MSR1P21757 451 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 GDF1P27539 372 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 SELENOPP49908 381 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 PRKXP51817 358 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 RRAS2P62070 204 aaPredicted RBP13.73□□□□□ -0.21
SHISA5-216ENST00000494854 CD83Q01151 205 aa13.73□□□□□ -0.21
SHISA5-216ENST00000494854 WIPI1Q5MNZ9 446 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms