RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ERVK-18Q9QC07 812 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 VPREB3Q9UKI3 123 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TMCC3Q9ULS5 477 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 NDUFAF1Q9Y375 327 aa6.76□□□□□ -1.33
USP39-216ENST00000490193 TRAV27A0A087WT01 109 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 IGHV3-64DA0A0J9YX35 117 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 ZNF816-ZNF321PA0A0X1KG74 233 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 LGALS8O00214 317 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 ANGPT2O15123 496 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 RER1O15258 196 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 SHOX2O60902 331 aaPredicted RBP6.75□□□□□ -1.33
USP39-216ENST00000490193 FCN3O75636 299 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 ECDO95905 644 aaPredicted RBP6.75□□□□□ -1.33
USP39-216ENST00000490193 HLA-DPB1P04440 258 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 CD14P08571 375 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 FBP1P09467 338 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 TGFBR2P37173 567 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 PRKCDQ05655 676 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 EGR3Q06889 387 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 HERPUD1Q15011 391 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 DHRS7BQ6IAN0 325 aaPredicted RBP6.75□□□□□ -1.33
USP39-216ENST00000490193 OAFQ86UD1 273 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 CALHM3Q86XJ0 350 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 GLB1L2Q8IW92 636 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 PLPP7Q8NBV4 271 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 SCCPDHQ8NBX0 429 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 BHLHE23Q8NDY6 225 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 OR51A7Q8NH64 312 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 PPP1R14AQ96A00 147 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 TLCD1Q96CP7 247 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 PRRC1Q96M27 445 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 Q96M85 177 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 HCAR1Q9BXC0 346 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 RNF7Q9UBF6 113 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 KAAG1Q9UBP8 84 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 GRHPRQ9UBQ7 328 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 FBLN5Q9UBX5 448 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 A4GNTQ9UNA3 340 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 CAB39Q9Y376 341 aaPredicted RBP6.75□□□□□ -1.33
USP39-216ENST00000490193 NOP16Q9Y3C1 178 aaKnown RBP6.75□□□□□ -1.33
USP39-216ENST00000490193 ADAM18Q9Y3Q7 739 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 KPTNQ9Y664 436 aa6.75□□□□□ -1.33
USP39-216ENST00000490193 TRAV38-1A0A0B4J264 116 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 A0A1B0GVI7 797 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 ELOVL7A1L3X0 281 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 EFCAB9A8MZ26 197 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 RNASEK-C17orf49H0YIS7 233 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 XKRYO14609 159 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 ADAM20O43506 726 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 KHDRBS3O75525 346 aaKnown RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 IFNA14P01570 189 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 ZNF26P17031 533 aaPredicted RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 OR1E2P47887 323 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 MAGOHP61326 146 aaKnown RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 NFYCQ13952 458 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 GK2Q14410 553 aaPredicted RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 MPPED2Q15777 294 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 FAM189A2Q15884 450 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 RSPO1Q2MKA7 263 aaPredicted RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 CDONQ4KMG0 1287 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 BEND6Q5SZJ8 279 aaPredicted RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 PRAMEF6Q5VXH4 476 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 NANOGP8Q6NSW7 305 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 PGM2L1Q6PCE3 622 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 C11orf88Q6PI97 169 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 TMPRSS11FQ6ZWK6 438 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 NRMQ8IXM6 262 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 RNF113BQ8IZP6 322 aaKnown RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 OFCC1Q8IZS5 231 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 LY6G5BQ8NDX9 201 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 C19orf18Q8NEA5 215 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 GJC3Q8NFK1 279 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 OR13C2Q8NGS9 318 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 CFHR4Q92496 578 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 ZNF583Q96ND8 569 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 ZNF570Q96NI8 536 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 PARD6BQ9BYG5 372 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 SLC22A4Q9H015 551 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 MMADHCQ9H3L0 296 aaPredicted RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 FN3KRPQ9HA64 309 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 VSX1Q9NZR4 365 aaPredicted RBP6.74□□□□□ -1.33
USP39-216ENST00000490193 RAB21Q9UL25 225 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 LHFPL6Q9Y693 200 aa6.74□□□□□ -1.33
USP39-216ENST00000490193 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 BTBD17A6NE02 478 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 OOEPA6NGQ2 149 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 CDC42EP2O14613 210 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 GMDSO60547 372 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 SLC16A7O60669 478 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 PRB2P02812 416 aaPredicted RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 ACSM4P0C7M7 580 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 SDHAP31040 664 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 IFNA8P32881 189 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 RPL4P36578 427 aaKnown RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 EFNB2P52799 333 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 LOXL3P58215 753 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 ARF6P62330 175 aa6.73□□□□□ -1.33
USP39-216ENST00000490193 HOXA4Q00056 320 aaPredicted RBP6.73□□□□□ -1.33
USP39-216ENST00000490193 KRR1Q13601 381 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms