RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NEURL4Q96JN8 1562 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 IGLV11-55A0A075B6I3 123 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 GSTTP1A0A1W2PQM5 241 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SLC22A20A6NK97 555 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 K7EMT4 169 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 CD5LO43866 347 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 MPDU1O75352 247 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SPAG7O75391 227 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 RDH16O75452 317 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 ETHE1O95571 254 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 TACSTD2P09758 323 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 ERGP11308 486 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 CSNK2A2P19784 350 aaPredicted RBP1.91□□□□□ -2.1
RFC4-213ENST00000489028 RAB5AP20339 215 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 IL32P24001 234 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 CEACAM3P40198 252 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 NBL1P41271 181 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 UBE2AP49459 152 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 RAB7AP51149 207 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 P2RX1P51575 399 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 RND2P52198 227 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 ZNF121P58317 390 aaPredicted RBP1.91□□□□□ -2.1
RFC4-213ENST00000489028 CDH17Q12864 832 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 GINS1Q14691 196 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 GABRA6Q16445 453 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 POU2AF1Q16633 256 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 HES5Q5TA89 166 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SLC25A25Q6KCM7 469 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 LYPD2Q6UXB3 125 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 WDR82Q6UXN9 313 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 C12orf54Q6X4T0 127 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SLC35D2Q76EJ3 337 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 FAM71AQ8IYT1 594 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 FAM58AQ8N1B3 248 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 ARHGAP18Q8N392 663 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 STPG2Q8N412 459 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 TRAM1L1Q8N609 369 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 ZNF709Q8N972 641 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 Q8N976 141 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SNX31Q8N9S9 440 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 GATSQ8NAP1 163 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 OR51L1Q8NGJ5 315 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 FAM131CQ96AQ9 280 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 RPEQ96AT9 228 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 TAAR1Q96RJ0 339 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 TMEM175Q9BSA9 504 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SLC25A2Q9BXI2 301 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 TM6SF2Q9BZW4 377 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 OR2AG1Q9H205 316 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 SLC39A1Q9NY26 324 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 ADA2Q9NZK5 511 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 WIF1Q9Y5W5 379 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 HIVEP2P31629 2446 aa1.91□□□□□ -2.1
RFC4-213ENST00000489028 AQRO60306 1485 aaKnown RBP eCLIP1.9□□□□□ -2.11
RFC4-213ENST00000489028 IGHV3-74A0A0B4J1X5 117 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 LOC100653049A0A140TA62 436 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 PLAC8L1A1L4L8 177 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 OR6C74A6NCV1 312 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 NCBP2LA6PVI3 153 aaKnown RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 COLCA2A8K830 154 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 SYCE1LA8MT33 242 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 PSMD11O00231 422 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 POLR1CO15160 346 aaPredicted RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 KDELR3O43731 214 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ANGPTL7O43827 346 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 NEMFO60524 1076 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 SLC19A2O60779 497 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 KRT34O76011 436 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 GABARAPO95166 117 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 TDP2O95551 362 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 HLA-DPB1P04440 258 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 KLK1P06870 262 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 MRPL3P09001 348 aaKnown RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 ATF6P18850 670 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 RAB3AP20336 220 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 MYL9P24844 172 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 CFHR2P36980 270 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 CSKP41240 450 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 CDKN2BP42772 138 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 UBE2NP61088 152 aaKnown RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 PPP1CBP62140 327 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 PSMC5P62195 406 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ARG2P78540 354 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 TSC22D1Q15714 1073 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 C5orf64Q2M2E5 130 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ZNF829Q3KNS6 432 aaPredicted RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 ABCA11PQ4W5N1 156 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 PRMT9Q6P2P2 845 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ARL9Q6T311 187 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 OR2W3Q7Z3T1 314 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 CBLN2Q8IUK8 224 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 RNF182Q8N6D2 247 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 CSGALNACT2Q8N6G5 542 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ZNF615Q8N8J6 731 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ASCC1Q8N9N2 400 aaKnown RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 SPERTQ8NA61 448 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 OR2L8Q8NGY9 312 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 UBALD1Q8TB05 177 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 TCP10LQ8TDR4 215 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ZFP90Q8TF47 636 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms